Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCDC138Q96M89 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC138Q96M89 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC138Q96M89 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC138Q96M89 U3.11-201ENST00000364476 212 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC068538.1-201ENST00000376856 336 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 RNU1-39P-201ENST00000383897 165 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 RNU6-195P-201ENST00000411352 109 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC138Q96M89 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC138Q96M89 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC138Q96M89 RPS24P1-201ENST00000438550 371 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AL136380.1-201ENST00000447970 162 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 NANOGP10-201ENST00000453325 895 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 MTND2P24-201ENST00000453434 806 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 TPT1P7-201ENST00000458300 517 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC091153.1-201ENST00000466297 402 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 RN7SL585P-201ENST00000470538 280 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC138Q96M89 RNU1-61P-201ENST00000516107 151 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 RNU6-390P-201ENST00000516259 103 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 Vault.3-201ENST00000516676 95 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AP001804.3-201ENST00000525146 880 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC093012.1-202ENST00000549403 582 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC128657.1-201ENST00000549459 145 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC138Q96M89 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC138Q96M89 AP005205.1-201ENST00000563503 508 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 MIR3913-1-201ENST00000577744 102 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 MTND1P15-201ENST00000579262 949 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC023575.1-201ENST00000580510 358 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC138Q96M89 ZNF415P1-201ENST00000582279 1166 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC245014.2-201ENST00000603689 287 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AP000860.1-201ENST00000605250 559 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC246785.4-201ENST00000605374 287 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC012603.1-201ENST00000606424 528 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 AC103710.2-201ENST00000609912 942 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 SDR42E1P2-201ENST00000614861 481 ntBASIC4.09□□□□□ -1.75
CCDC138Q96M89 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC138Q96M89 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC138Q96M89 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC138Q96M89 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC138Q96M89 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC138Q96M89 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC138Q96M89 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 RNY1P12-201ENST00000364251 105 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC138Q96M89 RPS3AP36-201ENST00000398190 775 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 RPL23AP26-201ENST00000412728 464 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL589823.1-201ENST00000429577 183 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL356867.1-201ENST00000429623 299 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC104850.1-201ENST00000435940 476 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 HMGN2P7-201ENST00000456186 273 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC109327.1-201ENST00000471666 403 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 RPS27AP1-201ENST00000475545 471 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC138Q96M89 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 HMGB3P15-201ENST00000507326 574 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 RNU2-10P-201ENST00000516375 211 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 FAM60DP-201ENST00000524174 632 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AP003392.2-201ENST00000527269 208 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 SYF2P1-201ENST00000550658 413 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL355836.1-201ENST00000555951 870 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC066616.2-201ENST00000559334 1481 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC106871.1-201ENST00000568324 3102 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 MIR3939-201ENST00000582614 106 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC004223.2-201ENST00000590309 544 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 IPO5P1-202ENST00000600039 287 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL161729.3-201ENST00000603533 673 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC091805.2-201ENST00000603848 235 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC098614.4-201ENST00000607601 462 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL161734.1-201ENST00000609720 557 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC064801.1-201ENST00000612025 407 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 Z99129.1-201ENST00000612510 255 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC091834.1-201ENST00000614543 472 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC138Q96M89 AC008785.1-201ENST00000624475 456 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 MIR3653-201ENST00000625572 110 ntBASIC4.08□□□□□ -1.76
CCDC138Q96M89 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC138Q96M89 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC138Q96M89 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms