Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNORD8-201ENST00000363915 110 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 Y_RNA.218-201ENST00000364218 104 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AC093840.1-201ENST00000511599 336 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 RNU6-390P-201ENST00000516259 103 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 MIR2355-201ENST00000517199 87 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 PRPF19P1-201ENST00000584766 898 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 AC005520.5-201ENST00000613926 164 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 CYP4F35P-202ENST00000636121 390 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AL022323.4-201ENST00000623980 13120 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 DDX10P1-201ENST00000448545 1933 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRCH3Q96II8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRCH3Q96II8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 RNU1-43P-201ENST00000365052 165 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 Y_RNA.324-201ENST00000365165 102 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 AC068538.1-201ENST00000376856 336 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 SNORD51-201ENST00000384320 80 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 RNU6-729P-201ENST00000384399 107 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 Y_RNA.569-201ENST00000384749 103 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 MIR569-201ENST00000385228 96 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 SNORA12.2-201ENST00000391040 156 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 Y_RNA.623-201ENST00000411128 95 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 AL590139.1-201ENST00000416267 400 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 RPL26P6-201ENST00000440913 438 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 NUTF2P7-201ENST00000453086 375 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 RN7SKP210-201ENST00000459176 261 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 snoU13.7-201ENST00000459220 104 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 RNU4-57P-201ENST00000515980 135 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 MIR4260-201ENST00000583107 67 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 AC005191.1-201ENST00000603950 358 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 SNORD113-5-201ENST00000607261 78 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 AL139099.4-201ENST00000614802 114 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 AC008785.1-201ENST00000624475 456 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 AC068769.1-201ENST00000474767 2426 ntBASIC6.22□□□□□ -1.41
LRCH3Q96II8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRCH3Q96II8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
LRCH3Q96II8 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LRCH3Q96II8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LRCH3Q96II8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
LRCH3Q96II8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
LRCH3Q96II8 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
LRCH3Q96II8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LRCH3Q96II8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
LRCH3Q96II8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
LRCH3Q96II8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRCH3Q96II8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRCH3Q96II8 RN7SKP104-201ENST00000362605 328 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 RN7SKP113-201ENST00000363891 295 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 Y_RNA.405-201ENST00000383979 100 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 Y_RNA.451-201ENST00000384200 100 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 Y_RNA.524-201ENST00000384564 100 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 Y_RNA.561-201ENST00000384694 100 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 AC108075.1-201ENST00000424692 529 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 AL133244.1-201ENST00000456007 258 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 RN7SL354P-201ENST00000469282 294 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 AP001025.1-201ENST00000486139 332 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 MIR8076-201ENST00000611401 83 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 AC073349.3-201ENST00000617616 186 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRCH3Q96II8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
LRCH3Q96II8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LRCH3Q96II8 AC005725.1-201ENST00000577346 2607 ntBASIC6.21□□□□□ -1.42
LRCH3Q96II8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LRCH3Q96II8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms