Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 RPL7P37-201ENST00000425095 738 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 RPS3AP12-201ENST00000443616 753 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC116533.1-201ENST00000459748 321 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 DYNLL1P5-201ENST00000467158 270 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC087879.1-201ENST00000474343 374 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC021382.1-201ENST00000483523 359 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC026801.1-201ENST00000497178 464 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC068305.1-201ENST00000497406 726 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 RNU6-941P-201ENST00000516346 108 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 RNU6-1069P-201ENST00000516612 133 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 SOD1P3-201ENST00000518682 454 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC090115.3-201ENST00000553218 849 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AL049779.2-201ENST00000553847 315 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AL049839.1-201ENST00000556151 657 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC024619.4-201ENST00000580924 316 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC010620.2-201ENST00000600135 313 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AL589674.2-201ENST00000604304 337 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 HMGN2P28-201ENST00000606102 262 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC015982.1-201ENST00000608113 465 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC091953.5-201ENST00000622919 233 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 SCARNA15-201ENST00000607520 4325 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 THAP12P4-201ENST00000528321 2266 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 AC107027.3-201ENST00000565095 3473 ntBASIC5.5□□□□□ -1.53
TRIM11Q96F44 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM11Q96F44 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM11Q96F44 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM11Q96F44 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC074029.4-201ENST00000624796 1859 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC008669.1-201ENST00000565823 2178 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 Y_RNA.81-201ENST00000362997 102 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RNU6-740P-201ENST00000364734 105 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RNU6-398P-201ENST00000384143 109 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 Y_RNA.526-201ENST00000384572 110 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RNU6-1127P-201ENST00000384580 107 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RNU6-95P-201ENST00000384697 107 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 MIR649-201ENST00000384843 97 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC097374.1-203ENST00000400783 485 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 C4BPAP2-201ENST00000428434 478 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RPL23AP69-201ENST00000431134 458 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 MYL8P-204ENST00000431574 518 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 MRPS18BP2-201ENST00000434310 759 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 NDUFB1P2-201ENST00000449477 176 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 Z92846.1-201ENST00000456203 268 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC005229.2-201ENST00000456995 399 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC091180.1-201ENST00000462104 372 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RPL21P8-201ENST00000465083 535 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RN7SL717P-201ENST00000478343 297 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 RNU6-1332P-201ENST00000516666 104 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC007991.1-201ENST00000522680 631 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 CYCSP28-201ENST00000534284 321 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 COX6CP3-201ENST00000580869 223 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 MIR3614-201ENST00000581261 86 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 VN1R84P-201ENST00000593697 235 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 AC130454.1-201ENST00000622948 401 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 AL353662.3-201ENST00000625131 237 ntBASIC5.49□□□□□ -1.53
TRIM11Q96F44 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM11Q96F44 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM11Q96F44 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRIM11Q96F44 AL450345.1-202ENST00000605741 3881 ntBASIC5.48□□□□□ -1.53
TRIM11Q96F44 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TRIM11Q96F44 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM11Q96F44 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM11Q96F44 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM11Q96F44 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM11Q96F44 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM11Q96F44 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
TRIM11Q96F44 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
TRIM11Q96F44 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
TRIM11Q96F44 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM11Q96F44 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms