Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC103798.2-201ENST00000624292 632 ntBASIC2.97□□□□□ -1.93
RNF139Q8WU17 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF139Q8WU17 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF139Q8WU17 AL355596.1-201ENST00000565399 3996 ntBASIC2.97□□□□□ -1.93
RNF139Q8WU17 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF139Q8WU17 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.97□□□□□ -1.93
RNF139Q8WU17 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF139Q8WU17 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.96□□□□□ -1.93
RNF139Q8WU17 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF139Q8WU17 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF139Q8WU17 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 RNU6-1180P-201ENST00000364935 107 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 SNORA18.3-201ENST00000384122 132 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 MIR135A2-201ENST00000384854 100 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 RNU2-47P-201ENST00000410649 186 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 RNU6-193P-201ENST00000410977 107 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 SDCBPP3-201ENST00000419629 891 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC087499.2-201ENST00000432861 149 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 ARPC3P1-201ENST00000437218 533 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 MTCYBP11-201ENST00000447254 1109 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 RPL23AP20-201ENST00000447965 421 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 PNPLA4P1-201ENST00000458328 305 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 RN7SL283P-201ENST00000489055 303 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 MTCO2P9-201ENST00000503214 694 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 HIGD1AP13-201ENST00000509878 289 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 AP001189.2-201ENST00000527320 189 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC044913.1-201ENST00000557200 430 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC098483.2-201ENST00000603158 454 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 RPL23AP88-201ENST00000605759 454 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AP005229.2-201ENST00000609980 697 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 Z99129.2-201ENST00000619967 314 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC010338.1-201ENST00000621823 717 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 U6.101-201ENST00000637707 76 ntBASIC2.96□□□□□ -1.94
RNF139Q8WU17 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RNF139Q8WU17 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RNF139Q8WU17 AC008264.2-201ENST00000610193 3731 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AC097714.1-201ENST00000511272 1647 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 SNORA80A-201ENST00000363922 136 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 RNU6-657P-201ENST00000383904 107 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AC096533.1-201ENST00000411645 353 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 YWHAZP7-201ENST00000436906 631 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AC000041.1-201ENST00000439655 175 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 AC096576.1-201ENST00000489014 359 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 AC008628.1-201ENST00000508663 265 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 RNU6-798P-201ENST00000516912 103 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 snoZ278.1-201ENST00000517059 112 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNF139Q8WU17 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 AMZ2P1-203ENST00000565833 850 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 ELOCP29-201ENST00000588193 334 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 DUXAP11-201ENST00000603858 526 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AL035413.2-201ENST00000604801 525 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AL137843.1-201ENST00000605078 385 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AP001521.1-201ENST00000609150 300 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 AC090115.4-201ENST00000609970 188 ntBASIC2.95□□□□□ -1.94
RNF139Q8WU17 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF139Q8WU17 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNF139Q8WU17 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF139Q8WU17 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF139Q8WU17 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 MIR181A2-201ENST00000384863 110 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 MIR627-201ENST00000384979 97 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 RAP1BP1-201ENST00000412709 553 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 BX682237.1-201ENST00000415016 335 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC027644.1-201ENST00000419595 298 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 DPRXP1-201ENST00000426312 460 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 MTND2P5-201ENST00000432656 1006 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC112653.1-201ENST00000443851 386 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms