Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 Z98751.3-201ENST00000604447 521 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC010201.1-201ENST00000605051 540 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-774P-201ENST00000363238 107 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-97P-201ENST00000363387 104 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-746P-201ENST00000384112 109 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-432P-201ENST00000384196 109 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AL035079.1-201ENST00000405210 287 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 RPL31P45-201ENST00000419532 356 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 COX6CP13-201ENST00000428703 226 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AL121871.1-201ENST00000443413 436 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AC073910.1-201ENST00000445047 438 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 HMGB3P21-201ENST00000452483 547 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 MTND4LP30-201ENST00000454092 297 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AC108059.3-201ENST00000456388 214 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 RN7SL354P-201ENST00000469282 294 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AC021382.1-201ENST00000483523 359 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 RNU2-10P-201ENST00000516375 211 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 SCARNA16.2-201ENST00000516520 172 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 OR5D17P-201ENST00000531492 978 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AC024619.4-201ENST00000580924 316 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 FTX_2.1-201ENST00000618816 94 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AC103858.2-201ENST00000621471 543 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 AP000843.1-201ENST00000624880 701 ntBASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.16□□□□□ -1.58
SHKBP1Q8TBC3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHKBP1Q8TBC3 AC116158.1-201ENST00000560231 2129 ntBASIC5.15□□□□□ -1.58
SHKBP1Q8TBC3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHKBP1Q8TBC3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHKBP1Q8TBC3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHKBP1Q8TBC3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHKBP1Q8TBC3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.39-201ENST00000362620 98 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RNA5SP219-201ENST00000390940 113 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 GLULP6-201ENST00000399502 913 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC069213.2-201ENST00000420238 366 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RPL7P46-201ENST00000425129 740 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 USMG5P1-201ENST00000425964 177 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 HIGD1AP11-201ENST00000438361 280 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RPL7AP61-201ENST00000443410 636 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC005008.1-201ENST00000456151 612 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RPL39P38-201ENST00000467018 153 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RPS23P3-201ENST00000470993 430 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RN7SL481P-201ENST00000477764 299 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RN7SL441P-201ENST00000492388 296 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC068305.1-201ENST00000497406 726 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC009901.1-201ENST00000506703 541 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RN7SKP276-201ENST00000516242 268 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RNA5SP384-201ENST00000516615 116 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 RNU1-54P-201ENST00000517181 120 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 LSM6P2-201ENST00000552208 177 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 VN1R84P-201ENST00000593697 235 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC096772.1-201ENST00000609146 564 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 AC025034.2-201ENST00000623264 286 ntBASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.15□□□□□ -1.59
SHKBP1Q8TBC3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms