Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.08□□□□□ -1.76
USP38Q8NB14 MTND5P13-201ENST00000513046 1079 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.08□□□□□ -1.76
USP38Q8NB14 MTND4LP18-201ENST00000526864 291 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.08□□□□□ -1.76
USP38Q8NB14 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.08□□□□□ -1.76
USP38Q8NB14 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
USP38Q8NB14 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP38Q8NB14 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.08□□□□□ -1.76
USP38Q8NB14 PIGPP4-201ENST00000584447 307 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.08□□□□□ -1.76
USP38Q8NB14 AC010591.1-201ENST00000603941 649 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 AL356585.4-201ENST00000623078 1229 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP38Q8NB14 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USP38Q8NB14 OTUD4P1-201ENST00000237841 3067 ntBASIC4.08□□□□□ -1.76
USP38Q8NB14 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP38Q8NB14 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
USP38Q8NB14 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 AL353743.1-202ENST00000431724 1695 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 RNU6-809P-201ENST00000384461 107 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AL139095.1-201ENST00000404326 391 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AL137014.1-201ENST00000420490 1226 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AC129850.1-201ENST00000436203 508 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 SNORA71B-202ENST00000439232 272 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 RPL7P36-201ENST00000444633 681 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AC009961.3-201ENST00000449832 765 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 CFTRP1-201ENST00000456646 183 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AL122001.1-201ENST00000457027 370 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AC010285.1-201ENST00000470580 392 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AC078785.3-201ENST00000476607 425 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 RPS3AP14-201ENST00000483907 780 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 NIPA2P2-201ENST00000496376 1083 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 RAC1P2-201ENST00000511164 579 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 SNORA31.20-201ENST00000517111 133 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AC025881.1-201ENST00000518851 512 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 SUMO2P20-201ENST00000520803 283 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AL121576.1-201ENST00000556055 276 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 ACTR3BP3-201ENST00000565577 979 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 OR4K8P-201ENST00000578842 1048 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AC112187.2-201ENST00000604345 283 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AL022161.1-201ENST00000604390 213 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AC091965.4-201ENST00000607691 587 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 MIR7851-201ENST00000610611 160 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AL355365.1-201ENST00000616480 294 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AC091965.5-201ENST00000624785 342 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 AC093591.3-201ENST00000634516 308 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
USP38Q8NB14 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP38Q8NB14 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.07□□□□□ -1.76
USP38Q8NB14 AC092447.10-201ENST00000620607 1652 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP38Q8NB14 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.06□□□□□ -1.76
USP38Q8NB14 GABPAP-201ENST00000419271 1356 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 SRP72P2-201ENST00000344851 1979 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP38Q8NB14 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.06□□□□□ -1.76
USP38Q8NB14 EZH2P1-201ENST00000431167 291 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 AC091862.1-201ENST00000438016 1100 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 KATNBL1P3-201ENST00000443475 909 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 BMI1P1-201ENST00000445879 941 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 COX6CP12-201ENST00000446748 202 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 AC234775.1-201ENST00000454247 670 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 SNRPGP3-201ENST00000469405 227 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.06□□□□□ -1.76
USP38Q8NB14 OR5BM1P-201ENST00000512021 366 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 AC017037.2-201ENST00000513850 890 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.06□□□□□ -1.76
USP38Q8NB14 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.06□□□□□ -1.76
USP38Q8NB14 AC060788.1-201ENST00000521318 469 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
USP38Q8NB14 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.06□□□□□ -1.76
USP38Q8NB14 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.06□□□□□ -1.76
USP38Q8NB14 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.06□□□□□ -1.76
USP38Q8NB14 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.06□□□□□ -1.76
USP38Q8NB14 ZNF192P1-203ENST00000565888 810 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 MIR4307-201ENST00000582802 84 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 MIR4672-201ENST00000583126 81 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 SNORD84-203ENST00000584275 78 ntBASIC4.06□□□□□ -1.76
USP38Q8NB14 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms