Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR412-201ENST00000362142 91 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.48-201ENST00000362710 103 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 LAP3P1-201ENST00000403648 294 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 PTMAP3-201ENST00000447474 330 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC068228.1-201ENST00000461723 211 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC098847.1-201ENST00000473094 348 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 RNU6-1023P-201ENST00000516137 106 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC036111.2-201ENST00000533247 901 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 HNRNPCP4-201ENST00000571636 900 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 MIR5701-3-201ENST00000578890 82 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 MIR5701-1-201ENST00000585138 82 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC123912.5-201ENST00000605470 343 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 MIR5701-2-201ENST00000615634 82 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC006065.5-201ENST00000623427 349 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 AC073488.6-201ENST00000632293 754 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 ZNF299P-201ENST00000406845 1804 ntBASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
DEPDC4Q8N2C3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AL031595.2-201ENST00000624215 19071 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 COX6B1P3-201ENST00000312310 260 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 OR10R3P-201ENST00000361688 942 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 RN7SKP185-201ENST00000362813 326 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 RNU6-512P-201ENST00000364438 103 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.562-201ENST00000384695 113 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 MIR514A1-201ENST00000385133 98 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 MT-TW-201ENST00000387382 68 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AL157702.1-201ENST00000398764 426 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 ELOCP20-201ENST00000422460 345 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AC006946.1-201ENST00000429106 328 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 RPS3AP46-201ENST00000448352 682 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AC009852.2-201ENST00000567898 485 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 MIR5696-201ENST00000578474 85 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AC124916.2-201ENST00000604416 224 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 RAC1P9-201ENST00000604990 392 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 AC008962.1-201ENST00000605729 304 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 MIR3976-201ENST00000606807 139 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 MIR4302-201ENST00000638058 60 ntBASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
DEPDC4Q8N2C3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 Y_RNA.222-201ENST00000364264 102 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 RNA5SP156-201ENST00000410250 110 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AL035422.1-201ENST00000414193 397 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AC007098.1-201ENST00000420122 367 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AL158156.1-201ENST00000422509 473 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AC139712.2-201ENST00000424302 339 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AC130360.1-201ENST00000425489 1117 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 RPS29P14-201ENST00000431518 171 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 CYCSP6-201ENST00000434498 302 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 SDC4P-201ENST00000453285 601 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 CEACAMP4-201ENST00000457676 421 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 U8.21-201ENST00000459536 136 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 RPS20P22-201ENST00000473700 357 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.43□□□□□ -1.54
DEPDC4Q8N2C3 SNORA40.15-201ENST00000516884 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms