Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AL645937.1-201ENST00000641739 1652 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC095050.2-201ENST00000510748 1458 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 RN7SKP44-201ENST00000363602 316 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 RNU4-75P-201ENST00000364621 146 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 RNU6-629P-201ENST00000384061 103 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 RNU6-1042P-201ENST00000384204 107 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 MIR1183-201ENST00000408856 89 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 RNU6-248P-201ENST00000410720 107 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 HMGN1P24-201ENST00000412282 298 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 SPA17P1-201ENST00000416656 452 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AL035423.1-201ENST00000420331 213 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 KCTD9P3-201ENST00000434597 1169 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 MTND6P13-201ENST00000443510 523 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC244505.5-201ENST00000443639 207 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 BTF3L4P4-201ENST00000506381 449 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 NDUFB4P2-201ENST00000509515 391 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 RNU6-405P-201ENST00000516637 110 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC026403.1-201ENST00000518938 295 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC007424.1-203ENST00000554613 687 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 MIR4528-201ENST00000577763 90 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC068790.2-201ENST00000602601 557 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC024220.1-201ENST00000603675 484 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC006566.1-201ENST00000608943 513 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AL355472.4-201ENST00000610233 626 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC244205.2-202ENST00000635781 342 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 AC004925.1-201ENST00000624256 2706 ntBASIC3.5□□□□□ -1.85
BEST3Q8N1M1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BEST3Q8N1M1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 RPS4XP5-202ENST00000449995 1334 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 RNA5SP235-201ENST00000365411 114 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 CCNG1P1-201ENST00000406783 885 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC091286.1-201ENST00000431233 461 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AL031667.1-201ENST00000440222 725 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 RAC1P7-201ENST00000445367 377 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 RN7SL93P-201ENST00000463035 293 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AP000873.1-201ENST00000463987 400 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AP003122.4-201ENST00000530980 758 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC123904.2-201ENST00000548059 300 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AL356432.3-201ENST00000568952 465 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 OR4K8P-201ENST00000578842 1048 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 MIR4644-201ENST00000579929 84 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 MIR5187-201ENST00000583479 76 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.49□□□□□ -1.85
BEST3Q8N1M1 AC244505.7-201ENST00000599675 272 ntBASIC3.49□□□□□ -1.85
BEST3Q8N1M1 CKS1BP3-201ENST00000600888 237 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms