Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CR381572.2-201ENST00000624852 397 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 DEFB108F-201ENST00000344638 222 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 SNORA22B-201ENST00000383876 138 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 RNU6-196P-201ENST00000384315 107 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 SNORD116-29-201ENST00000384516 83 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 RNA5SP332-201ENST00000391063 115 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 MRPS21P2-201ENST00000424704 264 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AL358176.2-201ENST00000425769 204 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 NRBF2P3-201ENST00000432731 865 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 RPL26P6-201ENST00000440913 438 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 HSPE1P6-201ENST00000479457 291 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC110792.1-201ENST00000491826 472 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 HIGD1AP13-201ENST00000509878 289 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 ENPP7P9-201ENST00000514456 627 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 RNU6-189P-201ENST00000516120 101 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 RNU6-559P-201ENST00000516151 98 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 Y_RNA.689-201ENST00000516589 107 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 IGKV2D-23-201ENST00000518179 286 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC006270.2-201ENST00000578523 652 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC007619.2-201ENST00000605743 379 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 Z82243.1-201ENST00000609432 473 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC009570.1-201ENST00000609599 745 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 MTCO1P12-201ENST00000414273 1543 ntBASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.37□□□□□ -1.55
NPAS4Q8IUM7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC126755.2-208ENST00000327792 462 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC138969.1-213ENST00000331436 462 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 RN7SKP145-201ENST00000363291 303 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 RNU6-1309P-201ENST00000363305 108 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 RNU6-639P-201ENST00000384074 107 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 RNU6-831P-201ENST00000384548 107 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 EIF4E2P1-201ENST00000393781 255 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 UBE2V1P2-201ENST00000397758 440 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AL583835.1-201ENST00000399570 407 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 POLHP1-201ENST00000411806 470 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 COX6CP13-201ENST00000428703 226 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 HMGB3P30-201ENST00000457863 606 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 snoU13.1-201ENST00000459157 104 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 RN7SL441P-201ENST00000492388 296 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AL049874.2-201ENST00000492636 288 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 RNU6-1038P-201ENST00000516516 104 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 Y_RNA.718-201ENST00000517110 102 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC090151.1-201ENST00000520784 730 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 RN7SL690P-201ENST00000582087 240 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 MIR3941-201ENST00000582572 103 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 POLR3GP2-201ENST00000588366 668 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC019193.3-201ENST00000609144 554 ntBASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms