Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 Y_RNA.314-201ENST00000365114 102 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 RNU6-1329P-201ENST00000365664 107 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 Y_RNA.785-201ENST00000384290 109 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 Y_RNA.483-201ENST00000384380 101 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 MIR1302-6-201ENST00000408466 90 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AL590135.1-201ENST00000422215 156 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 C4BPAP2-201ENST00000428434 478 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC090774.1-201ENST00000435925 246 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 KRT8P51-201ENST00000438938 274 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AL121871.1-201ENST00000443413 436 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC105399.1-202ENST00000447303 205 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 RNU6-1095P-201ENST00000516148 108 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC069113.1-201ENST00000517763 267 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 IGHV3-76-201ENST00000522465 295 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 AC114947.2-201ENST00000565748 2125 ntBASIC5.81□□□□□ -1.48
RNF135Q8IUD6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RNF135Q8IUD6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC107027.3-201ENST00000565095 3473 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 SNORD14.1-201ENST00000365609 90 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 SNORA51.8-201ENST00000384234 132 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 MIR130A-201ENST00000385274 89 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 RNA5SP91-201ENST00000390902 119 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 CRIP1P1-201ENST00000427567 185 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AL158071.1-201ENST00000430315 461 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 RPL21P41-201ENST00000459863 264 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC105758.1-201ENST00000506038 399 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 RN7SKP258-201ENST00000517151 304 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC007991.1-201ENST00000522680 631 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 OR4H12P-201ENST00000556269 907 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC060780.2-201ENST00000589047 198 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC012669.1-201ENST00000603209 283 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 SDR42E1P2-201ENST00000614861 481 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AL138825.1-201ENST00000618587 192 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 FTX_2.1-201ENST00000618816 94 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 AC103858.2-201ENST00000621471 543 ntBASIC5.8□□□□□ -1.48
RNF135Q8IUD6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF135Q8IUD6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 Y_RNA.562-201ENST00000384695 113 ntBASIC5.79□□□□□ -1.48
RNF135Q8IUD6 MIR192-201ENST00000384915 110 ntBASIC5.79□□□□□ -1.48
RNF135Q8IUD6 SYF2P2-201ENST00000417620 583 ntBASIC5.79□□□□□ -1.48
RNF135Q8IUD6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 PPP1R11P2-201ENST00000423543 382 ntBASIC5.79□□□□□ -1.48
RNF135Q8IUD6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 OR6D1P-201ENST00000436165 939 ntBASIC5.79□□□□□ -1.48
RNF135Q8IUD6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF135Q8IUD6 RPL7L1P1-201ENST00000448259 785 ntBASIC5.79□□□□□ -1.48
RNF135Q8IUD6 MTND4LP30-201ENST00000454092 297 ntBASIC5.79□□□□□ -1.48
RNF135Q8IUD6 PRELID3BP1-201ENST00000457142 540 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms