Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL022161.1-201ENST00000604390 213 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC245389.1-201ENST00000605141 529 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC012531.5-201ENST00000611375 151 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AL450472.3-201ENST00000615578 367 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LDB1Q86U70 AC095031.1-201ENST00000623685 672 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB1Q86U70 AC093591.3-201ENST00000634516 308 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AL034408.1-202ENST00000636088 415 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC012442.3-202ENST00000636742 206 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB1Q86U70 U6.98-201ENST00000637157 84 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB1Q86U70 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB1Q86U70 ZNF833P-201ENST00000424938 1494 ntBASIC3.47□□□□□ -1.85
LDB1Q86U70 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB1Q86U70 AL672296.1-201ENST00000427780 2158 ntBASIC3.46□□□□□ -1.85
LDB1Q86U70 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.46□□□□□ -1.85
LDB1Q86U70 RNU5F-7P-201ENST00000363696 115 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
LDB1Q86U70 DEFB109C-201ENST00000382575 264 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 DEFB109B-201ENST00000382656 264 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 MT-TH-201ENST00000387441 69 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB1Q86U70 PTMAP2-201ENST00000397627 327 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 SNORA11-201ENST00000408789 128 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB1Q86U70 ISCA1P2-201ENST00000438679 421 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 GDI2P2-201ENST00000445131 608 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 MTATP6P26-201ENST00000445926 662 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB1Q86U70 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB1Q86U70 AC073387.1-201ENST00000453261 709 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB1Q86U70 HMGN2P16-201ENST00000456802 261 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 MTCO1P42-201ENST00000457379 726 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB1Q86U70 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB1Q86U70 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.46□□□□□ -1.86
LDB1Q86U70 PAICSP4-201ENST00000517543 1253 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB1Q86U70 HMGN1P28-201ENST00000521340 364 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.46□□□□□ -1.86
LDB1Q86U70 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB1Q86U70 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.46□□□□□ -1.86
LDB1Q86U70 MED28P6-201ENST00000558776 231 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 AC008507.1-201ENST00000587506 734 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 AC012360.2-201ENST00000609349 391 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 AC243312.2-201ENST00000623340 601 ntBASIC3.46□□□□□ -1.86
LDB1Q86U70 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
LDB1Q86U70 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.46□□□□□ -1.86
LDB1Q86U70 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB1Q86U70 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LDB1Q86U70 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB1Q86U70 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB1Q86U70 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LDB1Q86U70 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB1Q86U70 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB1Q86U70 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
LDB1Q86U70 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDB1Q86U70 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.45□□□□□ -1.86
LDB1Q86U70 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB1Q86U70 MIR30E-201ENST00000362104 92 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 SKINT1L-201ENST00000401057 817 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 RNU6-516P-201ENST00000411381 104 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB1Q86U70 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB1Q86U70 ARF4P2-201ENST00000430209 526 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 ATP5JP1-201ENST00000431631 322 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 AC090774.1-201ENST00000435925 246 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 AL357552.1-201ENST00000445254 415 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 EPS15P1-201ENST00000448836 336 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB1Q86U70 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AL049830.2-201ENST00000480072 201 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AC105914.1-201ENST00000511798 226 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 RNU6-1003P-201ENST00000517099 105 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 AC025881.1-201ENST00000518851 512 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 MTND4LP18-201ENST00000526864 291 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB1Q86U70 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB1Q86U70 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.45□□□□□ -1.86
LDB1Q86U70 BDH2P1-201ENST00000602288 736 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AC105129.3-201ENST00000605455 485 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB1Q86U70 AC009093.8-201ENST00000641769 292 ntBASIC3.45□□□□□ -1.86
LDB1Q86U70 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms