Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 Y_RNA.408-201ENST00000383987 102 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RNU6-629P-201ENST00000384061 103 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RNU6-636P-201ENST00000384598 107 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RNU6-1300P-201ENST00000391046 108 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RPL21P3-201ENST00000395517 478 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 ANAPC10P1-201ENST00000395991 556 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AL161449.1-201ENST00000414531 1199 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AIMP1P1-201ENST00000418670 937 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 BX276092.3-201ENST00000424182 230 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AL513043.1-201ENST00000439124 535 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC092393.1-201ENST00000439625 742 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 ELOCP13-201ENST00000443934 329 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC004022.1-201ENST00000447766 1066 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 OFD1P3Y-201ENST00000453312 783 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 USP9YP25-201ENST00000457708 443 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC146507.2-201ENST00000460608 476 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 VPS26AP1-201ENST00000483197 979 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RNU6-311P-201ENST00000516224 102 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RNA5SP282-201ENST00000516355 108 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RN7SKP265-201ENST00000516448 223 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RNA5SP380-201ENST00000517190 98 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 ZNF705CP-201ENST00000530515 889 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AP001317.1-201ENST00000531194 960 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC093519.1-201ENST00000566109 298 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC107294.3-201ENST00000609211 526 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC013470.4-201ENST00000619978 986 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC009039.2-201ENST00000624524 529 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC130650.2-201ENST00000618736 2403 ntBASIC3.71□□□□□ -1.81
NPHP3Q7Z494 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPHP3Q7Z494 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.71□□□□□ -1.82
NPHP3Q7Z494 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPHP3Q7Z494 AF127577.6-201ENST00000623352 2191 ntBASIC3.71□□□□□ -1.82
NPHP3Q7Z494 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPHP3Q7Z494 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RNU6-989P-201ENST00000362756 107 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RNU6-1066P-201ENST00000363573 105 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RNU6-413P-201ENST00000384115 107 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 SNORA36C-201ENST00000384289 132 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 MIR513B-201ENST00000385136 84 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 ERHP2-201ENST00000402323 299 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC007435.1-201ENST00000421086 415 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC005345.1-201ENST00000431868 217 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RPL23AP16-201ENST00000441715 421 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RPL23AP76-201ENST00000441860 458 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 PTENP1-201ENST00000447117 1215 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 TRBV26-201ENST00000456572 344 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 MTCO3P2-201ENST00000457365 171 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC010301.1-201ENST00000473936 355 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 MTCYBP37-201ENST00000510642 1133 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC008837.2-201ENST00000513076 418 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RNU6-1073P-201ENST00000517182 106 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 DPRXP5-201ENST00000604662 539 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AL512506.2-201ENST00000624472 458 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AP001350.1-201ENST00000601906 1524 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 MIR512-1-201ENST00000384913 84 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RNU2-42P-201ENST00000410697 113 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 PTP4A1P5-201ENST00000420305 455 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 FNDC3CP-201ENST00000420795 1155 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RPL21P66-201ENST00000426566 466 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 RPL31P54-201ENST00000429803 370 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 HMGB3P12-201ENST00000438745 556 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 CR769776.1-201ENST00000441254 787 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC011979.1-201ENST00000472300 483 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC114322.1-201ENST00000506771 926 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 SNORA48.10-201ENST00000516965 160 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC087808.1-201ENST00000520501 361 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms