Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC244258.1-201ENST00000637553 1071 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC066616.2-201ENST00000559334 1481 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHFQ7M4L6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHFQ7M4L6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AP001486.2-201ENST00000561652 5113 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHFQ7M4L6 MIR548F1-201ENST00000408667 84 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 MTND1P21-201ENST00000412991 285 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 RAD23BP2-201ENST00000416003 1207 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 RPS15AP12-201ENST00000419498 388 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL137014.1-201ENST00000420490 1226 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 MTND1P12-201ENST00000455231 147 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 C1DP4-201ENST00000455429 424 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL136097.1-201ENST00000456945 913 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 RN7SL738P-201ENST00000470264 297 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC126182.1-201ENST00000478134 357 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC004924.1-201ENST00000480160 781 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 RPL7P23-201ENST00000493874 747 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 FTH1P21-201ENST00000512179 511 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 RNA5SP337-201ENST00000517007 109 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC124947.2-202ENST00000552735 133 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL121603.1-201ENST00000553815 142 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC136619.2-201ENST00000563361 631 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 MIR3167-201ENST00000579623 85 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 KC877982.1-201ENST00000602313 470 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC020910.2-201ENST00000603635 610 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL161734.1-201ENST00000609720 557 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 MIR6868-201ENST00000611215 58 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC245517.5-201ENST00000611529 162 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC090970.3-201ENST00000612566 866 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 uc_338.12-201ENST00000616344 181 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL158209.2-201ENST00000619266 216 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL353748.2-201ENST00000622148 471 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AL161637.1-201ENST00000622380 412 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 AC124864.2-201ENST00000624736 186 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
SHFQ7M4L6 MAPK10-372ENST00000641954 3413 ntBASIC3.51□□□□□ -1.85
SHFQ7M4L6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHFQ7M4L6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHFQ7M4L6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHFQ7M4L6 MTCO1P9-201ENST00000505577 1534 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHFQ7M4L6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHFQ7M4L6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHFQ7M4L6 XIAPP3-201ENST00000312918 795 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 RNU6-282P-201ENST00000365357 103 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 RPL17P50-201ENST00000396131 546 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 RPL7P60-201ENST00000397636 735 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 HLFP1-201ENST00000402375 499 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 SSXP9-201ENST00000417503 292 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC099677.1-201ENST00000420575 175 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC133104.1-201ENST00000429100 218 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC119618.1-201ENST00000434191 222 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC083863.1-201ENST00000438811 231 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 USP9YP15-201ENST00000442391 422 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 HMGN2P21-201ENST00000447764 270 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 RPS3AP50-201ENST00000487064 803 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 RPL7P47-201ENST00000497299 556 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHFQ7M4L6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AP000857.1-201ENST00000532151 543 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 CYCSP29-201ENST00000533731 318 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC018630.1-201ENST00000541376 925 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms