Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 Y_RNA.661-201ENST00000516003 99 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AP001922.4-201ENST00000526967 290 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 MIR3691-201ENST00000578066 90 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 BNIP3P16-201ENST00000589779 534 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AL031320.1-201ENST00000604177 357 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AC008162.1-201ENST00000604718 254 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AL670379.4-201ENST00000605279 254 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 RPSAP73-201ENST00000614820 330 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AL445363.3-201ENST00000623080 671 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 AP000542.2-201ENST00000623199 6179 ntBASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF111Q6ZNA4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 XIAPP3-201ENST00000312918 795 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 Y_RNA.47-201ENST00000362697 108 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RNU6-562P-201ENST00000362731 107 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 Y_RNA.364-201ENST00000365532 101 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AL391417.1-201ENST00000404100 426 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RN7SKP114-201ENST00000410327 279 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RNU4-25P-201ENST00000410569 230 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RN7SKP213-201ENST00000410746 298 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RPL30P3-201ENST00000424262 333 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AL360081.1-201ENST00000428299 555 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RPL21P112-201ENST00000434403 463 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RPL21P23-201ENST00000446654 460 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AC010655.1-201ENST00000449336 292 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 MTND5P30-201ENST00000452896 1731 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AL691482.1-201ENST00000453255 87 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AC007967.1-201ENST00000455422 1159 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 DYNLL1P5-201ENST00000467158 270 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AC104472.2-201ENST00000469035 601 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AC087385.1-201ENST00000475062 312 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 TRBV1-201ENST00000476502 284 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RPSAP50-201ENST00000481955 852 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AC097473.1-201ENST00000508142 408 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 SNORA25.10-201ENST00000515926 124 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RN7SKP66-201ENST00000516681 231 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AP000676.2-201ENST00000529711 301 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AL121576.1-201ENST00000556055 276 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RPL23AP84-201ENST00000571193 464 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 TVP23CP2-201ENST00000571473 623 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AC006116.3-201ENST00000592968 361 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AC020910.3-201ENST00000603701 874 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 FAM157A-202ENST00000615155 405 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 U4.1-201ENST00000620349 87 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 AL161637.1-201ENST00000622380 412 ntBASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF111Q6ZNA4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AC109780.1-201ENST00000451768 1344 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AC104118.1-201ENST00000607625 1589 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 SNURFL-201ENST00000309296 343 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 RNU6-946P-201ENST00000383878 107 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 SNORA2.3-201ENST00000383920 135 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 RNU6-339P-201ENST00000384310 107 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 Y_RNA.473-201ENST00000384333 102 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 MIR765-201ENST00000390226 114 ntBASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF111Q6ZNA4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms