Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AL136363.1-201ENST00000605349 337 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC246785.4-201ENST00000605374 287 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 MIR432-201ENST00000606207 94 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AC233309.1-201ENST00000619522 751 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AF117829.1-206ENST00000621883 3802 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 AL359715.5-201ENST00000623431 443 ntBASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PPP4R4Q6NUP7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 RNA5SP505-201ENST00000364748 108 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 SNORA20.2-201ENST00000383922 131 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 RNU5A-6P-201ENST00000384136 116 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 RNU2-36P-201ENST00000410361 191 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 RPL26P29-201ENST00000415623 438 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 RPS23P10-201ENST00000416185 486 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AL451054.2-201ENST00000420896 202 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC245054.1-201ENST00000420944 258 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC119618.1-201ENST00000434191 222 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 SNRPEP4-201ENST00000435815 279 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 ARPC3P1-201ENST00000437218 533 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 MTATP6P30-201ENST00000443540 664 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 MTCO3P20-201ENST00000454926 688 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 C1DP4-201ENST00000455429 424 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 RPL30P5-201ENST00000494923 336 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 RNU6-1256P-201ENST00000516539 103 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC090572.1-201ENST00000519251 160 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AL391840.1-201ENST00000571144 367 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 MIR4644-201ENST00000579929 84 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC110741.2-201ENST00000605278 268 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 MTND4P5-201ENST00000435821 1374 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 AC012618.3-205ENST00000637896 1496 ntBASIC4.22□□□□□ -1.73
PPP4R4Q6NUP7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.21□□□□□ -1.73
PPP4R4Q6NUP7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
PPP4R4Q6NUP7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PPP4R4Q6NUP7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PPP4R4Q6NUP7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 RNA5SP388-201ENST00000362584 119 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 U3.11-201ENST00000364476 212 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 Y_RNA.625-201ENST00000411256 107 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AMD1P2-201ENST00000412936 992 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC140479.3-201ENST00000418944 1126 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 MTCO2P11-201ENST00000431069 680 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC009237.8-201ENST00000445492 379 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 U3.44-201ENST00000458938 192 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 CASP1P1-201ENST00000526345 212 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 PHBP17-201ENST00000528576 541 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC093012.1-202ENST00000549403 582 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC093227.2-201ENST00000589357 285 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 DEFB131E-202ENST00000602581 683 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 AC138649.3-201ENST00000622154 254 ntBASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PPP4R4Q6NUP7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 AC018555.1-201ENST00000567548 1980 ntBASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 Y_RNA.22-201ENST00000362492 102 ntBASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 RNU6-398P-201ENST00000384143 109 ntBASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 MIR192-201ENST00000384915 110 ntBASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.2□□□□□ -1.74
PPP4R4Q6NUP7 AL513331.1-201ENST00000411908 397 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms