Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC178Q5BJE1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC178Q5BJE1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC178Q5BJE1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC178Q5BJE1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC178Q5BJE1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC178Q5BJE1 MTND5P33-201ENST00000571250 1450 ntBASIC4.69□□□□□ -1.66
CCDC178Q5BJE1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC178Q5BJE1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 RNY1P12-201ENST00000364251 105 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 MIR513A2-201ENST00000385249 127 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 MT-TL1-201ENST00000386347 75 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 MIR1193-201ENST00000408109 78 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 RNA5SP239-201ENST00000410218 129 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 HMGB3P20-201ENST00000417997 600 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 RPL30P3-201ENST00000424262 333 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 UBE2V1P13-201ENST00000436983 439 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 HMGB3P12-201ENST00000438745 556 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC021382.1-201ENST00000483523 359 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC117522.1-201ENST00000509821 380 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC114781.4-201ENST00000513707 639 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 RNU6-1220P-201ENST00000517126 108 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 MIR3167-201ENST00000579623 85 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 UBE2L4-201ENST00000587688 464 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AC005255.1-201ENST00000593748 216 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AL606490.9-201ENST00000603331 271 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AL049634.3-201ENST00000604968 457 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AL136363.1-201ENST00000605349 337 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AL596245.1-201ENST00000618994 362 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 AL158801.5-201ENST00000623123 465 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 MIR3662-201ENST00000637030 95 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 MIR1321-201ENST00000637766 79 ntBASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CCDC178Q5BJE1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 Y_RNA.38-201ENST00000362617 102 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 RNA5SP515-201ENST00000364570 118 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 U3.20-201ENST00000390909 217 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC068050.1-201ENST00000394891 380 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 RNA5SP104-201ENST00000410989 118 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AL391219.1-201ENST00000422570 483 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC092832.1-201ENST00000422934 400 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC092017.2-201ENST00000427600 362 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 PSMA2P3-201ENST00000429685 675 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 RPL23AP20-201ENST00000447965 421 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 RPS11P1-201ENST00000451072 473 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 RPL21P11-201ENST00000461458 483 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 HMGB1P21-201ENST00000502313 581 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 MTCO3P44-201ENST00000510977 541 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC108043.1-201ENST00000512696 574 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms