Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC021146.3-201ENST00000511911 260 ntBASIC5.73□□□□□ -1.49
CCDC27Q2M243 RAB9BP1-201ENST00000519581 626 ntBASIC5.73□□□□□ -1.49
CCDC27Q2M243 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC27Q2M243 AC100770.1-201ENST00000532310 322 ntBASIC5.73□□□□□ -1.49
CCDC27Q2M243 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC27Q2M243 OR4H12P-201ENST00000556269 907 ntBASIC5.73□□□□□ -1.49
CCDC27Q2M243 AC005730.3-201ENST00000583067 366 ntBASIC5.73□□□□□ -1.49
CCDC27Q2M243 AC006116.10-201ENST00000591836 581 ntBASIC5.73□□□□□ -1.49
CCDC27Q2M243 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC27Q2M243 AC113403.1-201ENST00000604910 193 ntBASIC5.73□□□□□ -1.49
CCDC27Q2M243 U6.114-201ENST00000636407 96 ntBASIC5.73□□□□□ -1.49
CCDC27Q2M243 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC27Q2M243 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC27Q2M243 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC27Q2M243 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC27Q2M243 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 MIR331-201ENST00000362302 94 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 RNU6-188P-201ENST00000364207 107 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 RNU6-76P-201ENST00000384060 104 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 RNU6-1181P-201ENST00000384191 106 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 DNAJC19P7-201ENST00000428811 344 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC024082.2-201ENST00000434771 238 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC010285.1-201ENST00000470580 392 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC018710.1-201ENST00000506509 158 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 SNORD60.2-201ENST00000516883 86 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 ERHP1-201ENST00000523006 310 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 OR5AL2P-201ENST00000532185 920 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 TRAV8-5-201ENST00000537369 341 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC012417.1-201ENST00000582307 1039 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC025253.1-201ENST00000613623 543 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC063943.3-201ENST00000615562 356 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 AP003122.6-201ENST00000623831 495 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC024614.3-201ENST00000637860 256 ntBASIC5.72□□□□□ -1.49
CCDC27Q2M243 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC27Q2M243 AC139713.2-214ENST00000642059 1811 ntBASIC5.71□□□□□ -1.49
CCDC27Q2M243 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC27Q2M243 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC27Q2M243 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.71□□□□□ -1.49
CCDC27Q2M243 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.71□□□□□ -1.49
CCDC27Q2M243 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.71□□□□□ -1.49
CCDC27Q2M243 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 AL133243.3-201ENST00000617415 3004 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC27Q2M243 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC27Q2M243 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 NACAP2-201ENST00000318548 624 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 Y_RNA.160-201ENST00000363677 92 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 MIR141-201ENST00000384975 95 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AL354719.1-201ENST00000406535 843 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AL356776.1-201ENST00000406574 447 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 RPS20P14-201ENST00000412545 360 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 EIF1P3-201ENST00000423841 334 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 AC068287.1-201ENST00000430283 295 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 ABCF2P2-201ENST00000450549 296 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 RPS29P15-201ENST00000458329 171 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 RN7SL691P-201ENST00000494487 301 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 AC098799.2-201ENST00000509466 868 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 AC008489.1-201ENST00000524271 483 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 FAM60BP-201ENST00000578364 658 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 AL021997.2-201ENST00000615674 271 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AC019278.1-201ENST00000623516 479 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AC092326.2-201ENST00000624772 1561 ntBASIC5.71□□□□□ -1.5
CCDC27Q2M243 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC27Q2M243 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CCDC27Q2M243 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC27Q2M243 AL137003.2-201ENST00000606924 2538 ntBASIC5.7□□□□□ -1.5
CCDC27Q2M243 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC27Q2M243 SNORD37.1-201ENST00000390968 65 ntBASIC5.7□□□□□ -1.5
CCDC27Q2M243 MIR1911-201ENST00000410783 80 ntBASIC5.7□□□□□ -1.5
CCDC27Q2M243 RNU6-1068P-201ENST00000410958 103 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms