Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RSPO4Q2I0M5 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
RSPO4Q2I0M5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.11□□□□□ -1.59
RSPO4Q2I0M5 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.11□□□□□ -1.59
RSPO4Q2I0M5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RSPO4Q2I0M5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RSPO4Q2I0M5 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 RNA5SP191-201ENST00000362585 102 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 Y_RNA.151-201ENST00000363566 112 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 RNA5SP205-201ENST00000364653 136 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 SYF2P2-201ENST00000417620 583 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC008280.1-201ENST00000418851 412 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AL354766.1-201ENST00000423396 542 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 CALM2P2-201ENST00000428512 440 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 PRDX3P3-201ENST00000447765 522 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC245100.2-201ENST00000454544 1679 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC010326.1-201ENST00000462726 602 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC021382.1-201ENST00000483523 359 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 TRBV5-2-201ENST00000489095 273 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC016559.2-201ENST00000510759 359 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 RNA5SP464-201ENST00000516251 108 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 IGKV2-36-201ENST00000519999 223 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AL121576.1-201ENST00000556055 276 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 SULT1C2P2-201ENST00000562517 294 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC007224.1-201ENST00000564410 144 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AC034105.4-201ENST00000568304 277 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 VN1R85P-201ENST00000601587 426 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 PSMA6P4-201ENST00000603247 718 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 NANOGP3-201ENST00000605855 286 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 AL138713.1-201ENST00000624026 2130 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 CDRT1-208ENST00000630868 794 ntBASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RSPO4Q2I0M5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AC092747.4-201ENST00000620519 1861 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AL355488.2-201ENST00000609909 2850 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 RNU5E-6P-201ENST00000365574 115 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 RNU6-921P-201ENST00000384361 107 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 RNU6-393P-201ENST00000384475 107 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 RNU6-1135P-201ENST00000411083 103 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 ELOCP18-201ENST00000434209 337 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 RPL34P20-201ENST00000442771 351 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AL359073.1-201ENST00000448036 403 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AL513124.1-201ENST00000450410 614 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 snoU13.8-201ENST00000458890 104 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AC020890.1-201ENST00000491837 504 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AC092436.3-201ENST00000511788 257 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 RNU6-844P-201ENST00000517175 102 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 CYCSP27-201ENST00000527643 293 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AC106785.1-201ENST00000565935 262 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 AC108706.1-201ENST00000611053 297 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 MIR1244-1-201ENST00000612829 85 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 MIR376A1-201ENST00000616574 68 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 MIR1244-3-201ENST00000635744 85 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 MIR1244-2-201ENST00000636449 85 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 MIR1244-4-202ENST00000636813 85 ntBASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.09□□□□□ -1.59
RSPO4Q2I0M5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.09□□□□□ -1.6
RSPO4Q2I0M5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RSPO4Q2I0M5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms