Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCN1BQ07699 AL049641.1-201ENST00000441055 1948 ntBASIC3.21□□□□□ -1.9
SCN1BQ07699 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.21□□□□□ -1.9
SCN1BQ07699 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
SCN1BQ07699 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN1BQ07699 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN1BQ07699 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCN1BQ07699 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN1BQ07699 RNU6-223P-201ENST00000362830 107 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 RNU6-799P-201ENST00000363567 107 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SCN1BQ07699 RNU6-741P-201ENST00000383889 107 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 MIR19A-201ENST00000384878 82 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 CCNG1P1-201ENST00000406783 885 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 RN7SKP159-201ENST00000410657 292 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 RN7SKP140-201ENST00000411196 284 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 RPS3AP25-201ENST00000411660 793 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN1BQ07699 Z85995.1-201ENST00000415547 335 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN1BQ07699 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 BX890604.2-201ENST00000427883 474 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC007919.1-201ENST00000429380 217 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AL117339.2-201ENST00000430475 180 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AL831737.1-201ENST00000441288 271 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 MTCO3P45-201ENST00000443036 613 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 RPL7P36-201ENST00000444633 681 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 MTCYBP3-201ENST00000445588 1137 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 TPT1P12-201ENST00000448968 492 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC008481.1-201ENST00000463278 396 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 SETP11-201ENST00000473027 690 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC072039.1-201ENST00000477611 581 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCN1BQ07699 RAC1P2-201ENST00000511164 579 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 SNORA3.4-201ENST00000515969 96 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 ELOCP32-201ENST00000548625 324 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 DNAJC8P1-201ENST00000554535 372 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AMZ2P1-203ENST00000565833 850 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN1BQ07699 ISCA1P3-201ENST00000577104 373 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AC002545.1-201ENST00000592511 181 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC004908.2-201ENST00000609090 574 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCN1BQ07699 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCN1BQ07699 AC021755.4-201ENST00000616620 456 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 AC012150.2-201ENST00000621300 544 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN1BQ07699 AC007496.3-201ENST00000624987 3443 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN1BQ07699 GABRG2-229ENST00000641017 3628 ntBASIC3.2□□□□□ -1.9
SCN1BQ07699 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SCN1BQ07699 AC103988.1-201ENST00000566382 2177 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 AC068647.1-201ENST00000489539 2265 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 CCT4P2-201ENST00000233836 1548 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN1BQ07699 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
SCN1BQ07699 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCN1BQ07699 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCN1BQ07699 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN1BQ07699 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCN1BQ07699 MIR372-201ENST00000362225 67 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 RNU6-660P-201ENST00000364566 109 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 RNU6-1027P-201ENST00000383998 107 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 RNU6-198P-201ENST00000384258 104 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 RNU6-1035P-201ENST00000384477 107 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 RNA5SP424-201ENST00000390988 115 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 HMGN1P24-201ENST00000412282 298 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 AP000907.1-201ENST00000428428 510 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN1BQ07699 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN1BQ07699 Z74696.2-201ENST00000436514 498 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN1BQ07699 PIGFP3-201ENST00000441918 722 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.19□□□□□ -1.9
SCN1BQ07699 AL606662.1-201ENST00000445763 553 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.19□□□□□ -1.9
SCN1BQ07699 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN1BQ07699 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.19□□□□□ -1.9
SCN1BQ07699 RNU6-390P-201ENST00000516259 103 ntBASIC3.19□□□□□ -1.9
SCN1BQ07699 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.19□□□□□ -1.9
SCN1BQ07699 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms