Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AC137800.2-201ENST00000574375 120 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 MIR3913-1-201ENST00000577744 102 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 MIR4528-201ENST00000577763 90 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.17□□□□□ -1.9
CX3CL1P78423 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AC105224.1-201ENST00000587055 421 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AC098614.4-201ENST00000607601 462 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AL451064.1-201ENST00000607718 471 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AL591424.2-201ENST00000617023 128 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AC138932.5-201ENST00000617759 563 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 U7.8-201ENST00000619968 63 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AL136313.1-201ENST00000624804 202 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 EXOC5P1-201ENST00000510543 1969 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CX3CL1P78423 RLIMP1-201ENST00000339626 1680 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CL1P78423 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CL1P78423 IPO8P1-201ENST00000455509 3109 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CL1P78423 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CL1P78423 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.16□□□□□ -1.9
CX3CL1P78423 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.16□□□□□ -1.9
CX3CL1P78423 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CL1P78423 RNU5E-1-201ENST00000362477 120 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNU6-623P-201ENST00000363143 105 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNY4P34-201ENST00000364779 95 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNY3P13-201ENST00000365542 102 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 DEFB109C-201ENST00000382575 264 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 DEFB109B-201ENST00000382656 264 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 OR5H15-201ENST00000383696 930 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNU1-39P-201ENST00000383897 165 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CX3CL1P78423 MRPL42P2-201ENST00000403169 426 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNA5SP317-201ENST00000410176 116 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNA5SP129-201ENST00000410276 118 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNU4-6P-201ENST00000410804 122 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNA5SP311-201ENST00000411290 116 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RPS15AP12-201ENST00000419498 388 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CL1P78423 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AC019097.1-201ENST00000424783 735 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.16□□□□□ -1.9
CX3CL1P78423 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AC009961.2-201ENST00000435771 251 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.16□□□□□ -1.9
CX3CL1P78423 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.16□□□□□ -1.9
CX3CL1P78423 RABEPKP1-201ENST00000440529 1026 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 MTCO3P45-201ENST00000443036 613 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 GAPDHP17-201ENST00000449858 1001 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.16□□□□□ -1.9
CX3CL1P78423 HMGN2P16-201ENST00000456802 261 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AC008481.1-201ENST00000463278 396 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CL1P78423 RPS4XP13-201ENST00000483219 789 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CL1P78423 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CL1P78423 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CL1P78423 HMGB3P15-201ENST00000507326 574 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 SNORA70.14-201ENST00000516205 110 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNA5SP315-201ENST00000516340 116 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNA5SP312-201ENST00000517068 116 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 RNU6-64P-201ENST00000517119 105 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AC136624.4-201ENST00000573044 370 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.16□□□□□ -1.9
CX3CL1P78423 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AC090578.1-201ENST00000604955 591 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AC004696.1-201ENST00000614345 607 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 AL139089.1-201ENST00000620372 975 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 AC048347.1-201ENST00000624621 427 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 PISRT1-201ENST00000626175 531 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 MIR4275-201ENST00000636486 87 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CX3CL1P78423 AL133383.2-201ENST00000622958 2336 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CX3CL1P78423 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.16□□□□□ -1.9
CX3CL1P78423 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.15□□□□□ -1.9
CX3CL1P78423 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CX3CL1P78423 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CX3CL1P78423 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CX3CL1P78423 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CX3CL1P78423 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CX3CL1P78423 RNU6-50P-201ENST00000362356 103 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 RNA5SP399-201ENST00000364003 117 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CL1P78423 SNORA36C-201ENST00000384289 132 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 RPL23AP32-201ENST00000395315 459 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC110754.1-201ENST00000399740 601 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 RPL21P65-201ENST00000406094 466 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms