Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL353746.1-201ENST00000566293 6881 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDL3P58872 LINC02471-203ENST00000641941 4752 ntBASIC4.37□□□□□ -1.71
RHBDL3P58872 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDL3P58872 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RHBDL3P58872 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RHBDL3P58872 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RHBDL3P58872 AL138713.1-201ENST00000624026 2130 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RHBDL3P58872 RNU5F-7P-201ENST00000363696 115 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 SNORA9-201ENST00000384215 133 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 Y_RNA.560-201ENST00000384689 102 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 RNVU1-14-201ENST00000384770 164 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 MIR218-2-201ENST00000385006 110 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 AL138878.1-201ENST00000405131 347 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 RNU6-920P-201ENST00000410926 92 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 AC018630.2-202ENST00000422992 927 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 NDUFB4P7-201ENST00000423198 363 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 AC087650.1-201ENST00000431445 468 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.36□□□□□ -1.71
RHBDL3P58872 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.36□□□□□ -1.71
RHBDL3P58872 AC108059.3-201ENST00000456388 214 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RHBDL3P58872 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.36□□□□□ -1.71
RHBDL3P58872 AC091489.2-201ENST00000566263 604 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.36□□□□□ -1.71
RHBDL3P58872 AC007038.2-201ENST00000608095 740 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 OR10AB1P-201ENST00000609613 938 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 TUG1_2.1-201ENST00000614234 87 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 AC068831.7-201ENST00000616954 363 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 AC078883.4-201ENST00000623218 367 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 AC019226.2-201ENST00000625973 424 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 AC092192.1-201ENST00000633154 1018 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 OR6C71P-202ENST00000641886 1107 ntBASIC4.36□□□□□ -1.71
RHBDL3P58872 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.36□□□□□ -1.71
RHBDL3P58872 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RHBDL3P58872 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
RHBDL3P58872 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RHBDL3P58872 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.36□□□□□ -1.71
RHBDL3P58872 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.35□□□□□ -1.71
RHBDL3P58872 Y_RNA.97-201ENST00000363094 102 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 Y_RNA.169-201ENST00000363745 96 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 RHOT1P2-201ENST00000366423 333 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 SNORA36C-201ENST00000384289 132 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 RNU6-278P-201ENST00000390945 109 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 TXNP7-201ENST00000406296 293 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 RNA5SP39-201ENST00000411245 120 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC009237.5-201ENST00000414271 501 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 DBIP2-201ENST00000419076 262 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RHBDL3P58872 ARF4P2-201ENST00000430209 526 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.35□□□□□ -1.71
RHBDL3P58872 ATP5JP1-201ENST00000431631 322 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC073063.1-201ENST00000434352 607 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.35□□□□□ -1.71
RHBDL3P58872 RPL17P49-201ENST00000443728 411 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 BMI1P1-201ENST00000445879 941 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.35□□□□□ -1.71
RHBDL3P58872 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.35□□□□□ -1.71
RHBDL3P58872 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.35□□□□□ -1.71
RHBDL3P58872 RNA5SP310-201ENST00000459084 116 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC008155.2-201ENST00000464337 397 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.35□□□□□ -1.71
RHBDL3P58872 AC112204.1-201ENST00000502591 103 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 CDC42P4-201ENST00000510507 563 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.35□□□□□ -1.71
RHBDL3P58872 SCARNA15.2-201ENST00000516409 127 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC106038.2-201ENST00000520706 568 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 MTND4LP18-201ENST00000526864 291 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AP000857.1-201ENST00000532151 543 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.35□□□□□ -1.71
RHBDL3P58872 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.35□□□□□ -1.71
RHBDL3P58872 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.35□□□□□ -1.71
RHBDL3P58872 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 OR4H12P-201ENST00000556269 907 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.35□□□□□ -1.71
RHBDL3P58872 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.35□□□□□ -1.71
RHBDL3P58872 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.35□□□□□ -1.71
RHBDL3P58872 AC008962.1-201ENST00000605729 304 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 AC096577.2-201ENST00000611455 153 ntBASIC4.35□□□□□ -1.71
RHBDL3P58872 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RHBDL3P58872 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
RHBDL3P58872 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RHBDL3P58872 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDL3P58872 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.34□□□□□ -1.71
RHBDL3P58872 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDL3P58872 RNY3P9-201ENST00000384727 106 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 MIR93-201ENST00000385024 80 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 MIR514A1-201ENST00000385133 98 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 RPS4XP3-201ENST00000398541 413 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 SKINT1L-201ENST00000401057 817 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDL3P58872 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.34□□□□□ -1.71
RHBDL3P58872 AC097713.2-201ENST00000430199 356 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDL3P58872 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 NDUFB1P1-201ENST00000435191 180 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 NDUFB4P6-201ENST00000436819 366 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 RPL22P17-201ENST00000438729 315 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms