Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR4443-201ENST00000585052 53 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AC010928.3-201ENST00000587712 541 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AC104237.2-201ENST00000612456 443 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AC099669.2-201ENST00000616549 437 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 MIR6130-201ENST00000619419 109 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AL160413.1-201ENST00000622780 310 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 AC108751.5-201ENST00000492880 1336 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 MTND4P14-201ENST00000435799 1354 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN1P58418 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN1P58418 API5P2-201ENST00000397055 1498 ntBASIC4.1□□□□□ -1.75
CLRN1P58418 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.1□□□□□ -1.75
CLRN1P58418 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.1□□□□□ -1.75
CLRN1P58418 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN1P58418 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.1□□□□□ -1.75
CLRN1P58418 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLRN1P58418 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CLRN1P58418 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLRN1P58418 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.1□□□□□ -1.75
CLRN1P58418 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN1P58418 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN1P58418 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLRN1P58418 RNU6-1155P-201ENST00000363554 107 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 MIR550A3-201ENST00000390735 95 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 NCOR1P3-201ENST00000420479 303 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.09□□□□□ -1.75
CLRN1P58418 AL451054.2-201ENST00000420896 202 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN1P58418 MTCO3P45-201ENST00000443036 613 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.09□□□□□ -1.75
CLRN1P58418 ISCUP1-201ENST00000454451 448 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.09□□□□□ -1.75
CLRN1P58418 AC092324.1-201ENST00000468671 324 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AC010631.1-201ENST00000474150 156 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 RN7SL432P-201ENST00000484057 298 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AC007686.1-201ENST00000488511 463 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 RN7SL346P-201ENST00000491561 294 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AC108022.1-201ENST00000493466 478 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.09□□□□□ -1.75
CLRN1P58418 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CLRN1P58418 FAM206BP-201ENST00000510179 541 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AF186190.1-201ENST00000517470 480 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 MTND4P7-201ENST00000523876 130 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AC109635.4-202ENST00000531666 412 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.09□□□□□ -1.75
CLRN1P58418 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CLRN1P58418 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN1P58418 MIR5583-1-201ENST00000580941 59 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.09□□□□□ -1.75
CLRN1P58418 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN1P58418 uc_338.34-201ENST00000617467 174 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN1P58418 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN1P58418 AL133216.2-202ENST00000634512 349 ntBASIC4.09□□□□□ -1.75
CLRN1P58418 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
CLRN1P58418 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN1P58418 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLRN1P58418 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLRN1P58418 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.09□□□□□ -1.76
CLRN1P58418 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
CLRN1P58418 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLRN1P58418 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLRN1P58418 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.09□□□□□ -1.76
CLRN1P58418 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.09□□□□□ -1.76
CLRN1P58418 AL139811.1-201ENST00000424779 2299 ntBASIC4.09□□□□□ -1.76
CLRN1P58418 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN1P58418 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN1P58418 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN1P58418 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN1P58418 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN1P58418 RNU6-1287P-201ENST00000362914 107 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN1P58418 Y_RNA.394-201ENST00000383942 103 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 RNU6-356P-201ENST00000384140 107 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 RNU6-1060P-201ENST00000384664 107 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 SNORD96B-201ENST00000386148 79 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN1P58418 AL359634.1-202ENST00000404721 284 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 VDAC1P9-201ENST00000412766 841 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN1P58418 SSXP9-201ENST00000417503 292 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN1P58418 AC099677.1-201ENST00000420575 175 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN1P58418 HSPE1P1-201ENST00000421494 318 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 RPS12P10-201ENST00000427031 377 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AL360081.1-201ENST00000428299 555 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms