Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL445669.2-201ENST00000454425 421 ntBASIC3.31□□□□□ -1.88
VCPP55072 AC092155.2-201ENST00000454675 477 ntBASIC3.31□□□□□ -1.88
VCPP55072 AC005410.1-202ENST00000460347 485 ntBASIC3.31□□□□□ -1.88
VCPP55072 AC011979.1-201ENST00000472300 483 ntBASIC3.31□□□□□ -1.88
VCPP55072 AC093278.1-201ENST00000494700 600 ntBASIC3.31□□□□□ -1.88
VCPP55072 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.31□□□□□ -1.88
VCPP55072 AC239860.2-201ENST00000525886 270 ntBASIC3.31□□□□□ -1.88
VCPP55072 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VCPP55072 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VCPP55072 SNRPGP16-201ENST00000533275 226 ntBASIC3.31□□□□□ -1.88
VCPP55072 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.31□□□□□ -1.88
VCPP55072 H3F3AP1-201ENST00000559984 334 ntBASIC3.31□□□□□ -1.88
VCPP55072 UBL5P2-201ENST00000583788 219 ntBASIC3.31□□□□□ -1.88
VCPP55072 AP001521.1-201ENST00000609150 300 ntBASIC3.31□□□□□ -1.88
VCPP55072 AC008083.4-201ENST00000615076 444 ntBASIC3.31□□□□□ -1.88
VCPP55072 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.31□□□□□ -1.88
VCPP55072 AC040168.1-201ENST00000623594 991 ntBASIC3.31□□□□□ -1.88
VCPP55072 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.31□□□□□ -1.88
VCPP55072 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
VCPP55072 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VCPP55072 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VCPP55072 AC107982.1-201ENST00000507171 1300 ntBASIC3.3□□□□□ -1.88
VCPP55072 AC109315.1-201ENST00000584143 1347 ntBASIC3.3□□□□□ -1.88
VCPP55072 Y_RNA.25-201ENST00000362528 102 ntBASIC3.3□□□□□ -1.88
VCPP55072 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VCPP55072 AL031679.1-201ENST00000400616 525 ntBASIC3.3□□□□□ -1.88
VCPP55072 RNA5SP508-201ENST00000411327 119 ntBASIC3.3□□□□□ -1.88
VCPP55072 OR2AS1P-201ENST00000427827 319 ntBASIC3.3□□□□□ -1.88
VCPP55072 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.3□□□□□ -1.88
VCPP55072 AC108734.1-201ENST00000439549 399 ntBASIC3.3□□□□□ -1.88
VCPP55072 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.3□□□□□ -1.88
VCPP55072 AC007327.1-201ENST00000447461 264 ntBASIC3.3□□□□□ -1.88
VCPP55072 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.3□□□□□ -1.88
VCPP55072 PABPC1P3-201ENST00000469174 459 ntBASIC3.3□□□□□ -1.88
VCPP55072 RN7SL283P-201ENST00000489055 303 ntBASIC3.3□□□□□ -1.88
VCPP55072 AC114322.1-201ENST00000506771 926 ntBASIC3.3□□□□□ -1.88
VCPP55072 POU5F1P7-201ENST00000508759 541 ntBASIC3.3□□□□□ -1.88
VCPP55072 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.3□□□□□ -1.88
VCPP55072 RN7SKP132-201ENST00000516001 208 ntBASIC3.3□□□□□ -1.88
VCPP55072 RN7SKP31-201ENST00000516354 278 ntBASIC3.3□□□□□ -1.88
VCPP55072 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
VCPP55072 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.3□□□□□ -1.88
VCPP55072 ERHP1-201ENST00000523006 310 ntBASIC3.3□□□□□ -1.88
VCPP55072 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.3□□□□□ -1.88
VCPP55072 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
VCPP55072 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.3□□□□□ -1.88
VCPP55072 HMGB1P6-201ENST00000569046 646 ntBASIC3.3□□□□□ -1.88
VCPP55072 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.3□□□□□ -1.88
VCPP55072 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.3□□□□□ -1.88
VCPP55072 MTND3P19-201ENST00000603825 345 ntBASIC3.3□□□□□ -1.88
VCPP55072 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
VCPP55072 AC022509.4-201ENST00000621404 572 ntBASIC3.3□□□□□ -1.88
VCPP55072 AC006111.3-201ENST00000622137 383 ntBASIC3.3□□□□□ -1.88
VCPP55072 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.3□□□□□ -1.88
VCPP55072 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VCPP55072 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.3□□□□□ -1.88
VCPP55072 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VCPP55072 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
VCPP55072 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VCPP55072 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VCPP55072 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.29□□□□□ -1.88
VCPP55072 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
VCPP55072 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VCPP55072 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 MIR506-201ENST00000384998 124 ntBASIC3.29□□□□□ -1.88
VCPP55072 ERHP2-201ENST00000402323 299 ntBASIC3.29□□□□□ -1.88
VCPP55072 AL024474.1-201ENST00000404655 591 ntBASIC3.29□□□□□ -1.88
VCPP55072 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.29□□□□□ -1.88
VCPP55072 EEF1A1P41-201ENST00000414667 207 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.29□□□□□ -1.88
VCPP55072 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VCPP55072 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.29□□□□□ -1.88
VCPP55072 AL606517.1-201ENST00000446914 387 ntBASIC3.29□□□□□ -1.88
VCPP55072 RPS29P26-201ENST00000477483 171 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 SNORA31.8-201ENST00000516327 108 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.29□□□□□ -1.88
VCPP55072 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.29□□□□□ -1.88
VCPP55072 AC008127.2-201ENST00000549925 1075 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.29□□□□□ -1.88
VCPP55072 AADACP1-206ENST00000561502 1193 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC023813.2-201ENST00000564321 469 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
VCPP55072 VN1R90P-201ENST00000595717 726 ntBASIC3.29□□□□□ -1.88
VCPP55072 PRELID3BP8-201ENST00000604148 295 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC105148.1-201ENST00000604961 409 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.29□□□□□ -1.88
VCPP55072 AL050303.3-201ENST00000613704 284 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC231759.1-201ENST00000616455 597 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC002076.2-201ENST00000617362 122 ntBASIC3.29□□□□□ -1.88
VCPP55072 AC009318.4-201ENST00000620496 486 ntBASIC3.29□□□□□ -1.88
VCPP55072 AL078595.3-201ENST00000623815 1166 ntBASIC3.29□□□□□ -1.88
VCPP55072 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms