Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR8070-201ENST00000616510 88 ntBASIC2.24□□□□□ -2.05
NUP98P52948 U73479.1-201ENST00000618062 168 ntBASIC2.24□□□□□ -2.05
NUP98P52948 U6.48-201ENST00000618523 106 ntBASIC2.24□□□□□ -2.05
NUP98P52948 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.24□□□□□ -2.05
NUP98P52948 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NUP98P52948 AC011978.2-201ENST00000569835 2054 ntBASIC2.24□□□□□ -2.05
NUP98P52948 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NUP98P52948 UBE2L2-201ENST00000254302 429 ntBASIC2.24□□□□□ -2.05
NUP98P52948 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NUP98P52948 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.24□□□□□ -2.05
NUP98P52948 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.24□□□□□ -2.05
NUP98P52948 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.24□□□□□ -2.05
NUP98P52948 AL021397.1-201ENST00000451806 248 ntBASIC2.24□□□□□ -2.05
NUP98P52948 C1DP3-201ENST00000455013 423 ntBASIC2.24□□□□□ -2.05
NUP98P52948 RPL23AP70-201ENST00000483361 460 ntBASIC2.24□□□□□ -2.05
NUP98P52948 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.24□□□□□ -2.05
NUP98P52948 AC104115.2-201ENST00000523026 687 ntBASIC2.24□□□□□ -2.05
NUP98P52948 CBX3P4-201ENST00000538909 354 ntBASIC2.24□□□□□ -2.05
NUP98P52948 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.24□□□□□ -2.05
NUP98P52948 SUB1P3-201ENST00000564581 315 ntBASIC2.24□□□□□ -2.05
NUP98P52948 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NUP98P52948 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.24□□□□□ -2.05
NUP98P52948 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.24□□□□□ -2.05
NUP98P52948 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.24□□□□□ -2.05
NUP98P52948 CKAP2P1-201ENST00000555477 2049 ntBASIC2.23□□□□□ -2.05
NUP98P52948 ADAM3A-203ENST00000461344 2157 ntBASIC2.23□□□□□ -2.05
NUP98P52948 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NUP98P52948 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NUP98P52948 RNU6-185P-201ENST00000384421 107 ntBASIC2.23□□□□□ -2.05
NUP98P52948 TOMM22P1-201ENST00000418578 312 ntBASIC2.23□□□□□ -2.05
NUP98P52948 AL590762.3-201ENST00000436372 640 ntBASIC2.23□□□□□ -2.05
NUP98P52948 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.23□□□□□ -2.05
NUP98P52948 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.23□□□□□ -2.05
NUP98P52948 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.23□□□□□ -2.05
NUP98P52948 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.23□□□□□ -2.05
NUP98P52948 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.23□□□□□ -2.05
NUP98P52948 SNORA25.15-201ENST00000516487 89 ntBASIC2.23□□□□□ -2.05
NUP98P52948 COX6CP5-201ENST00000527162 228 ntBASIC2.23□□□□□ -2.05
NUP98P52948 MTCYBP41-201ENST00000528913 1123 ntBASIC2.23□□□□□ -2.05
NUP98P52948 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NUP98P52948 AP001029.3-201ENST00000588063 596 ntBASIC2.23□□□□□ -2.05
NUP98P52948 AC023043.2-201ENST00000589678 1026 ntBASIC2.23□□□□□ -2.05
NUP98P52948 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NUP98P52948 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
NUP98P52948 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NUP98P52948 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
NUP98P52948 AC002546.1-201ENST00000588041 2504 ntBASIC2.22□□□□□ -2.05
NUP98P52948 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NUP98P52948 RNA5SP37-201ENST00000365420 130 ntBASIC2.22□□□□□ -2.05
NUP98P52948 SET-203ENST00000372688 801 ntTSL 2 BASIC2.22□□□□□ -2.05
NUP98P52948 RNU6-1181P-201ENST00000384191 106 ntBASIC2.22□□□□□ -2.05
NUP98P52948 RNA5SP247-201ENST00000411181 105 ntBASIC2.22□□□□□ -2.05
NUP98P52948 SETP8-201ENST00000435341 628 ntBASIC2.22□□□□□ -2.05
NUP98P52948 Z99714.1-201ENST00000450463 807 ntBASIC2.22□□□□□ -2.05
NUP98P52948 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.22□□□□□ -2.05
NUP98P52948 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.22□□□□□ -2.05
NUP98P52948 HMGB1P38-201ENST00000490557 577 ntBASIC2.22□□□□□ -2.05
NUP98P52948 NAMPTP2-201ENST00000505629 1115 ntBASIC2.22□□□□□ -2.05
NUP98P52948 MTCYBP37-201ENST00000510642 1133 ntBASIC2.22□□□□□ -2.05
NUP98P52948 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.22□□□□□ -2.05
NUP98P52948 AC239860.2-201ENST00000525886 270 ntBASIC2.22□□□□□ -2.05
NUP98P52948 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.22□□□□□ -2.05
NUP98P52948 OR11H5P-201ENST00000554039 926 ntBASIC2.22□□□□□ -2.05
NUP98P52948 AL163153.1-201ENST00000554223 283 ntBASIC2.22□□□□□ -2.05
NUP98P52948 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.22□□□□□ -2.05
NUP98P52948 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.22□□□□□ -2.05
NUP98P52948 MIR378A-201ENST00000362177 66 ntBASIC2.21□□□□□ -2.05
NUP98P52948 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
NUP98P52948 RNU6-564P-201ENST00000410983 104 ntBASIC2.21□□□□□ -2.05
NUP98P52948 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.21□□□□□ -2.05
NUP98P52948 RPL7P46-201ENST00000425129 740 ntBASIC2.21□□□□□ -2.05
NUP98P52948 DPPA2P1-201ENST00000428060 556 ntBASIC2.21□□□□□ -2.05
NUP98P52948 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.21□□□□□ -2.05
NUP98P52948 RPL21P2-201ENST00000440049 481 ntBASIC2.21□□□□□ -2.05
NUP98P52948 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.21□□□□□ -2.05
NUP98P52948 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.21□□□□□ -2.05
NUP98P52948 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.21□□□□□ -2.05
NUP98P52948 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.21□□□□□ -2.05
NUP98P52948 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.21□□□□□ -2.05
NUP98P52948 EIF4EP5-201ENST00000528228 640 ntBASIC2.21□□□□□ -2.05
NUP98P52948 RPL23AP78-201ENST00000599928 470 ntBASIC2.21□□□□□ -2.05
NUP98P52948 DUXAP3-201ENST00000603616 594 ntBASIC2.21□□□□□ -2.05
NUP98P52948 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
NUP98P52948 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.21□□□□□ -2.05
NUP98P52948 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.21□□□□□ -2.05
NUP98P52948 PABPC1P7-201ENST00000413177 1513 ntBASIC2.21□□□□□ -2.06
NUP98P52948 Z82209.1-201ENST00000422141 2135 ntBASIC2.21□□□□□ -2.06
NUP98P52948 DEFB109C-201ENST00000382575 264 ntBASIC2.21□□□□□ -2.06
NUP98P52948 DEFB109B-201ENST00000382656 264 ntBASIC2.21□□□□□ -2.06
NUP98P52948 HMGN2P35-201ENST00000412164 270 ntBASIC2.21□□□□□ -2.06
NUP98P52948 RPL23AP36-201ENST00000413895 458 ntBASIC2.21□□□□□ -2.06
NUP98P52948 USP9YP27-201ENST00000418455 438 ntBASIC2.21□□□□□ -2.06
NUP98P52948 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.21□□□□□ -2.06
NUP98P52948 AC006548.1-201ENST00000427470 102 ntBASIC2.21□□□□□ -2.06
NUP98P52948 TRIM60P18-201ENST00000441518 828 ntBASIC2.21□□□□□ -2.06
NUP98P52948 AC096992.1-201ENST00000459808 709 ntBASIC2.21□□□□□ -2.06
NUP98P52948 SYPL1P1-201ENST00000473622 768 ntBASIC2.21□□□□□ -2.06
NUP98P52948 MTCO3P35-201ENST00000485582 781 ntBASIC2.21□□□□□ -2.06
NUP98P52948 TRAV11-201ENST00000539512 339 ntBASIC2.21□□□□□ -2.06
NUP98P52948 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms