Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL353746.1-201ENST00000566293 6881 ntBASIC3.4□□□□□ -1.86
PDX1P52945 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PDX1P52945 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.4□□□□□ -1.86
PDX1P52945 TNPO1P3-201ENST00000436471 2662 ntBASIC3.4□□□□□ -1.86
PDX1P52945 AC092447.10-201ENST00000620607 1652 ntBASIC3.4□□□□□ -1.86
PDX1P52945 AL645937.1-201ENST00000641739 1652 ntBASIC3.4□□□□□ -1.86
PDX1P52945 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PDX1P52945 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.4□□□□□ -1.86
PDX1P52945 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDX1P52945 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDX1P52945 FRG1BP-201ENST00000278882 761 ntBASIC3.4□□□□□ -1.87
PDX1P52945 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDX1P52945 MIR634-201ENST00000385208 97 ntBASIC3.4□□□□□ -1.87
PDX1P52945 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PDX1P52945 MTCYBP36-201ENST00000404146 440 ntBASIC3.4□□□□□ -1.87
PDX1P52945 MIR1305-201ENST00000408300 86 ntBASIC3.4□□□□□ -1.87
PDX1P52945 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.4□□□□□ -1.87
PDX1P52945 AC096664.2-201ENST00000411843 406 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.4□□□□□ -1.87
PDX1P52945 RPS27AP14-201ENST00000422868 454 ntBASIC3.4□□□□□ -1.87
PDX1P52945 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.4□□□□□ -1.87
PDX1P52945 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.4□□□□□ -1.87
PDX1P52945 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.4□□□□□ -1.87
PDX1P52945 TRIM60P18-201ENST00000441518 828 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.4□□□□□ -1.87
PDX1P52945 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.4□□□□□ -1.87
PDX1P52945 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.4□□□□□ -1.87
PDX1P52945 U3.44-201ENST00000458938 192 ntBASIC3.4□□□□□ -1.87
PDX1P52945 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.4□□□□□ -1.87
PDX1P52945 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.4□□□□□ -1.87
PDX1P52945 AC080014.1-201ENST00000496877 1201 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AC093663.1-201ENST00000497190 394 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AC021678.1-201ENST00000505195 936 ntBASIC3.4□□□□□ -1.87
PDX1P52945 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.4□□□□□ -1.87
PDX1P52945 AC117532.1-201ENST00000514638 323 ntBASIC3.4□□□□□ -1.87
PDX1P52945 SNORA31.20-201ENST00000517111 133 ntBASIC3.4□□□□□ -1.87
PDX1P52945 IGKV2D-23-201ENST00000518179 286 ntBASIC3.4□□□□□ -1.87
PDX1P52945 HIGD1AP10-201ENST00000527837 282 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.4□□□□□ -1.87
PDX1P52945 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.4□□□□□ -1.87
PDX1P52945 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.4□□□□□ -1.87
PDX1P52945 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.4□□□□□ -1.87
PDX1P52945 AC091489.2-201ENST00000566263 604 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.4□□□□□ -1.87
PDX1P52945 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.4□□□□□ -1.87
PDX1P52945 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.4□□□□□ -1.87
PDX1P52945 AC012493.2-201ENST00000595083 291 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.4□□□□□ -1.87
PDX1P52945 AP001981.2-201ENST00000603241 418 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.4□□□□□ -1.87
PDX1P52945 AC080013.6-201ENST00000606185 215 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.4□□□□□ -1.87
PDX1P52945 AC073114.1-201ENST00000612027 490 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AL590099.1-201ENST00000615276 138 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AL356585.4-201ENST00000623078 1229 ntBASIC3.4□□□□□ -1.87
PDX1P52945 AL732618.1-201ENST00000623251 301 ntBASIC3.4□□□□□ -1.87
PDX1P52945 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDX1P52945 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDX1P52945 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDX1P52945 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDX1P52945 AL513185.3-201ENST00000433335 1300 ntBASIC3.4□□□□□ -1.87
PDX1P52945 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDX1P52945 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PDX1P52945 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.39□□□□□ -1.87
PDX1P52945 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.39□□□□□ -1.87
PDX1P52945 AL157700.1-201ENST00000561973 1432 ntBASIC3.39□□□□□ -1.87
PDX1P52945 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PDX1P52945 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.39□□□□□ -1.87
PDX1P52945 RNU6-1155P-201ENST00000363554 107 ntBASIC3.39□□□□□ -1.87
PDX1P52945 RNA5SP235-201ENST00000365411 114 ntBASIC3.39□□□□□ -1.87
PDX1P52945 AL138880.1-201ENST00000405824 642 ntBASIC3.39□□□□□ -1.87
PDX1P52945 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.39□□□□□ -1.87
PDX1P52945 AC017079.2-201ENST00000416102 485 ntBASIC3.39□□□□□ -1.87
PDX1P52945 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.39□□□□□ -1.87
PDX1P52945 AC129850.1-201ENST00000436203 508 ntBASIC3.39□□□□□ -1.87
PDX1P52945 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.39□□□□□ -1.87
PDX1P52945 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 HMGB3P30-201ENST00000457863 606 ntBASIC3.39□□□□□ -1.87
PDX1P52945 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.39□□□□□ -1.87
PDX1P52945 AC105313.1-201ENST00000509121 353 ntBASIC3.39□□□□□ -1.87
PDX1P52945 FTH1P9-201ENST00000513251 355 ntBASIC3.39□□□□□ -1.87
PDX1P52945 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 RNU6-1095P-201ENST00000516148 108 ntBASIC3.39□□□□□ -1.87
PDX1P52945 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.39□□□□□ -1.87
PDX1P52945 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.39□□□□□ -1.87
PDX1P52945 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.39□□□□□ -1.87
PDX1P52945 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.39□□□□□ -1.87
PDX1P52945 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.39□□□□□ -1.87
PDX1P52945 CR383656.7-201ENST00000548164 174 ntBASIC3.39□□□□□ -1.87
PDX1P52945 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.39□□□□□ -1.87
PDX1P52945 AC011611.1-201ENST00000552179 197 ntBASIC3.39□□□□□ -1.87
PDX1P52945 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.39□□□□□ -1.87
PDX1P52945 AC012414.6-201ENST00000568241 401 ntBASIC3.39□□□□□ -1.87
PDX1P52945 AC034268.2-201ENST00000571784 482 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms