Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.89□□□□□ -1.31
PRIM1P49642 AC126177.3-201ENST00000551839 688 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.89□□□□□ -1.31
PRIM1P49642 EDDM3DP-201ENST00000554692 434 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PRIM1P49642 NF1P5-201ENST00000588287 448 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 AL591926.8-201ENST00000616876 211 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.89□□□□□ -1.31
PRIM1P49642 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PRIM1P49642 EOGT-210ENST00000615922 1931 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 OR4F13P-202ENST00000560066 2054 ntBASIC6.89□□□□□ -1.31
PRIM1P49642 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PRIM1P49642 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PRIM1P49642 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PRIM1P49642 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PRIM1P49642 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.88□□□□□ -1.31
PRIM1P49642 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
PRIM1P49642 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PRIM1P49642 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PRIM1P49642 MIR133A2-201ENST00000347538 102 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 SNORD50B-201ENST00000364995 70 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PRIM1P49642 Y_RNA.539-201ENST00000384635 107 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.88□□□□□ -1.31
PRIM1P49642 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.88□□□□□ -1.31
PRIM1P49642 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.88□□□□□ -1.31
PRIM1P49642 AL139109.1-201ENST00000455491 297 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.88□□□□□ -1.31
PRIM1P49642 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.88□□□□□ -1.31
PRIM1P49642 AC018437.1-201ENST00000492214 406 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 RNU6-397P-201ENST00000516226 104 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 AC091144.1-201ENST00000519573 138 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.88□□□□□ -1.31
PRIM1P49642 AC122688.1-201ENST00000541494 223 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 AC068790.4-201ENST00000602474 263 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 AL355812.1-201ENST00000603215 216 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 AC091925.2-201ENST00000625059 256 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 AC073869.8-201ENST00000641806 335 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PRIM1P49642 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
PRIM1P49642 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
PRIM1P49642 ZNF72P-201ENST00000425869 1908 ntBASIC6.88□□□□□ -1.31
PRIM1P49642 AC092747.4-201ENST00000620519 1861 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.87□□□□□ -1.31
PRIM1P49642 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PRIM1P49642 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 AL391987.6-201ENST00000305671 199 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 RNA5SP391-201ENST00000363456 119 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 Y_RNA.200-201ENST00000364018 102 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 RNU6-45P-201ENST00000384471 107 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 RNU6-1081P-201ENST00000384537 107 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 RNU6-1203P-201ENST00000410703 110 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 AL133482.1-201ENST00000415988 498 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.87□□□□□ -1.31
PRIM1P49642 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.87□□□□□ -1.31
PRIM1P49642 AL353997.1-201ENST00000432936 108 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.87□□□□□ -1.31
PRIM1P49642 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.87□□□□□ -1.31
PRIM1P49642 NDUFB4P10-201ENST00000452541 359 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 AC013470.1-201ENST00000453438 462 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 RPS23P5-201ENST00000495419 428 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.87□□□□□ -1.31
PRIM1P49642 Y_RNA.713-201ENST00000517013 96 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 AC109329.1-201ENST00000518744 317 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.87□□□□□ -1.31
PRIM1P49642 AP002770.2-201ENST00000543613 532 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.87□□□□□ -1.31
PRIM1P49642 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.87□□□□□ -1.31
PRIM1P49642 AC104763.2-201ENST00000604179 382 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.87□□□□□ -1.31
PRIM1P49642 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PRIM1P49642 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
PRIM1P49642 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.87□□□□□ -1.31
PRIM1P49642 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.87□□□□□ -1.31
PRIM1P49642 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
PRIM1P49642 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PRIM1P49642 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
PRIM1P49642 DDX18P3-201ENST00000404856 2007 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PRIM1P49642 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.86□□□□□ -1.31
PRIM1P49642 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PRIM1P49642 RNU1-76P-201ENST00000362903 159 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 U3.29-201ENST00000391296 212 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 RPL11P3-201ENST00000395256 523 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
PRIM1P49642 MIR1182-201ENST00000408363 97 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 RNU2-14P-201ENST00000411053 191 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 Y_RNA.793-201ENST00000411222 111 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.86□□□□□ -1.31
PRIM1P49642 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.86□□□□□ -1.31
PRIM1P49642 AC016712.1-201ENST00000431088 378 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 AC053481.1-201ENST00000467217 306 ntBASIC6.86□□□□□ -1.31
PRIM1P49642 MTCO3P44-201ENST00000510977 541 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms