Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AP001025.2-201ENST00000490908 477 ntBASIC3.45□□□□□ -1.86
LHX1P48742 AC093278.1-201ENST00000494700 600 ntBASIC3.45□□□□□ -1.86
LHX1P48742 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.45□□□□□ -1.86
LHX1P48742 AC034159.1-201ENST00000513885 583 ntBASIC3.45□□□□□ -1.86
LHX1P48742 RN7SKP57-201ENST00000517248 293 ntBASIC3.45□□□□□ -1.86
LHX1P48742 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.45□□□□□ -1.86
LHX1P48742 AC087276.1-201ENST00000529659 480 ntBASIC3.45□□□□□ -1.86
LHX1P48742 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LHX1P48742 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.45□□□□□ -1.86
LHX1P48742 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.45□□□□□ -1.86
LHX1P48742 MIR3186-201ENST00000577404 85 ntBASIC3.45□□□□□ -1.86
LHX1P48742 MIR3690-201ENST00000580266 75 ntBASIC3.45□□□□□ -1.86
LHX1P48742 TUG1_1.1-201ENST00000610654 145 ntBASIC3.45□□□□□ -1.86
LHX1P48742 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LHX1P48742 AC092628.2-201ENST00000622492 339 ntBASIC3.45□□□□□ -1.86
LHX1P48742 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.45□□□□□ -1.86
LHX1P48742 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.45□□□□□ -1.86
LHX1P48742 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
LHX1P48742 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LHX1P48742 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LHX1P48742 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
LHX1P48742 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.44□□□□□ -1.86
LHX1P48742 AC092447.10-201ENST00000620607 1652 ntBASIC3.44□□□□□ -1.86
LHX1P48742 GABPAP-201ENST00000419271 1356 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AL672167.1-206ENST00000356293 943 ntBASIC3.44□□□□□ -1.86
LHX1P48742 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LHX1P48742 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 RNU6-1207P-201ENST00000384343 107 ntBASIC3.44□□□□□ -1.86
LHX1P48742 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LHX1P48742 RN7SKP266-201ENST00000410232 287 ntBASIC3.44□□□□□ -1.86
LHX1P48742 RNU2-37P-201ENST00000410695 177 ntBASIC3.44□□□□□ -1.86
LHX1P48742 RNA5SP229-201ENST00000410809 99 ntBASIC3.44□□□□□ -1.86
LHX1P48742 RNU2-71P-201ENST00000411395 189 ntBASIC3.44□□□□□ -1.86
LHX1P48742 RPL30P2-201ENST00000414021 291 ntBASIC3.44□□□□□ -1.86
LHX1P48742 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.44□□□□□ -1.86
LHX1P48742 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.44□□□□□ -1.86
LHX1P48742 BEND7P1-201ENST00000422058 457 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 AC079780.1-201ENST00000428259 207 ntBASIC3.44□□□□□ -1.86
LHX1P48742 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.44□□□□□ -1.86
LHX1P48742 UBE2D3P1-201ENST00000436669 444 ntBASIC3.44□□□□□ -1.86
LHX1P48742 MTCYBP39-201ENST00000437562 491 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.44□□□□□ -1.86
LHX1P48742 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.44□□□□□ -1.86
LHX1P48742 HMGB3P8-201ENST00000449709 577 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.44□□□□□ -1.86
LHX1P48742 AL133217.1-201ENST00000450980 425 ntBASIC3.44□□□□□ -1.86
LHX1P48742 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.44□□□□□ -1.86
LHX1P48742 RNU7-125P-201ENST00000458760 62 ntBASIC3.44□□□□□ -1.86
LHX1P48742 RPL23AP62-201ENST00000463396 453 ntBASIC3.44□□□□□ -1.86
LHX1P48742 VN1R17P-201ENST00000472048 1090 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AL024509.2-201ENST00000493462 493 ntBASIC3.44□□□□□ -1.86
LHX1P48742 RN7SL504P-201ENST00000494496 287 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AC106872.3-201ENST00000495104 446 ntBASIC3.44□□□□□ -1.86
LHX1P48742 MLLT10P2-201ENST00000506434 249 ntBASIC3.44□□□□□ -1.86
LHX1P48742 KLHL2P1-201ENST00000508691 521 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AC017037.2-201ENST00000513850 890 ntBASIC3.44□□□□□ -1.86
LHX1P48742 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.44□□□□□ -1.86
LHX1P48742 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.44□□□□□ -1.86
LHX1P48742 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.44□□□□□ -1.86
LHX1P48742 MIR2682-201ENST00000580305 110 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AC090616.2-202ENST00000584248 222 ntBASIC3.44□□□□□ -1.86
LHX1P48742 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 BNIP3P23-201ENST00000599655 511 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AC006254.3-201ENST00000603353 884 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 AC006023.2-201ENST00000609916 167 ntBASIC3.44□□□□□ -1.86
LHX1P48742 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AC138932.5-201ENST00000617759 563 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AL360181.4-201ENST00000621752 134 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AL353748.2-201ENST00000622148 471 ntBASIC3.44□□□□□ -1.86
LHX1P48742 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AC019226.2-201ENST00000625973 424 ntBASIC3.44□□□□□ -1.86
LHX1P48742 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LHX1P48742 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.44□□□□□ -1.86
LHX1P48742 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LHX1P48742 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
LHX1P48742 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LHX1P48742 AC007496.3-201ENST00000624987 3443 ntBASIC3.43□□□□□ -1.86
LHX1P48742 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.43□□□□□ -1.86
LHX1P48742 RNU5A-2P-201ENST00000384337 116 ntBASIC3.43□□□□□ -1.86
LHX1P48742 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LHX1P48742 HSPE1P26-201ENST00000405341 275 ntBASIC3.43□□□□□ -1.86
LHX1P48742 MTCO1P17-201ENST00000411522 491 ntBASIC3.43□□□□□ -1.86
LHX1P48742 HMGB1P11-201ENST00000413899 637 ntBASIC3.43□□□□□ -1.86
LHX1P48742 RPL23AP39-201ENST00000415533 405 ntBASIC3.43□□□□□ -1.86
LHX1P48742 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.43□□□□□ -1.86
LHX1P48742 DUTP6-201ENST00000425573 462 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AL512649.1-201ENST00000428997 581 ntBASIC3.43□□□□□ -1.86
LHX1P48742 ARF4P2-201ENST00000430209 526 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AL353705.1-201ENST00000433468 480 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.43□□□□□ -1.86
LHX1P48742 AL121871.1-201ENST00000443413 436 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.43□□□□□ -1.86
LHX1P48742 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms