Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MTCO3P44-201ENST00000510977 541 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 RNY4P37-201ENST00000516225 96 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AP000889.1-201ENST00000530968 660 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AP003385.6-201ENST00000531603 374 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.39□□□□□ -1.87
NEDD4P46934 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 MIR4999-201ENST00000585029 91 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AC011471.1-201ENST00000585766 187 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.39□□□□□ -1.87
NEDD4P46934 AC024153.1-201ENST00000603103 365 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AL137843.1-201ENST00000605078 385 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AC107294.3-201ENST00000609211 526 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AC135507.2-201ENST00000612443 309 ntBASIC3.39□□□□□ -1.87
NEDD4P46934 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.39□□□□□ -1.87
NEDD4P46934 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEDD4P46934 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD4P46934 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD4P46934 NUP58P1-201ENST00000502546 1738 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 SNORD82-201ENST00000365530 70 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 RNU6-339P-201ENST00000384310 107 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 EI24P2-201ENST00000397776 1076 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 AF228730.1-201ENST00000397972 663 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 MTATP6P17-201ENST00000431030 672 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 CETN4P-201ENST00000432407 469 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD4P46934 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD4P46934 AL109741.2-201ENST00000455561 343 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD4P46934 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD4P46934 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD4P46934 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD4P46934 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD4P46934 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD4P46934 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD4P46934 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.38□□□□□ -1.87
NEDD4P46934 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.38□□□□□ -1.87
NEDD4P46934 AC006499.2-201ENST00000513470 337 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 SCARNA13-201ENST00000516672 275 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 AC093331.1-201ENST00000521474 169 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 DEFB131D-201ENST00000526803 184 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NEDD4P46934 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.38□□□□□ -1.87
NEDD4P46934 AC079600.2-201ENST00000550076 130 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 LARP7P2-201ENST00000575306 125 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD4P46934 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD4P46934 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.38□□□□□ -1.87
NEDD4P46934 AL136981.2-201ENST00000617319 734 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NEDD4P46934 AC006386.2-201ENST00000624491 75 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 AC012005.1-201ENST00000624575 75 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 AC017037.3-201ENST00000625016 472 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 AL137790.1-201ENST00000634283 177 ntBASIC3.38□□□□□ -1.87
NEDD4P46934 SGO1P2-201ENST00000429458 1589 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 DDX43P2-201ENST00000604753 1354 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEDD4P46934 RNU1-35P-201ENST00000362782 153 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 RPL23AP29-201ENST00000397284 453 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 RNA5SP56-201ENST00000410277 118 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD4P46934 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD4P46934 AL953862.1-201ENST00000423016 168 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 MTND5P25-201ENST00000430499 799 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 RPS6P15-201ENST00000431996 751 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NEDD4P46934 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 AL354941.1-201ENST00000438600 464 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 AC025750.2-201ENST00000442609 450 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD4P46934 ARPC3P5-201ENST00000448802 534 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 CEACAMP4-201ENST00000457676 421 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 RPS3AP14-201ENST00000483907 780 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD4P46934 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NEDD4P46934 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD4P46934 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.37□□□□□ -1.87
NEDD4P46934 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD4P46934 TRAV37-201ENST00000553906 342 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.37□□□□□ -1.87
NEDD4P46934 AC090888.2-201ENST00000559765 1144 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD4P46934 AC145350.1-201ENST00000567426 208 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.37□□□□□ -1.87
NEDD4P46934 AC083760.1-201ENST00000589621 670 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 IGHV3-29-201ENST00000604817 344 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NEDD4P46934 AC091304.6-201ENST00000619761 202 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 Z99129.2-201ENST00000619967 314 ntBASIC3.37□□□□□ -1.87
NEDD4P46934 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD4P46934 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.37□□□□□ -1.87
NEDD4P46934 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms