Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCNFP41002 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCNFP41002 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.94□□□□□ -1.62
CCNFP41002 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.93□□□□□ -1.62
CCNFP41002 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.93□□□□□ -1.62
CCNFP41002 Z73965.1-201ENST00000623412 2297 ntBASIC4.93□□□□□ -1.62
CCNFP41002 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCNFP41002 Y_RNA.146-201ENST00000363549 102 ntBASIC4.93□□□□□ -1.62
CCNFP41002 U8.4-201ENST00000363626 134 ntBASIC4.93□□□□□ -1.62
CCNFP41002 Y_RNA.167-201ENST00000363735 109 ntBASIC4.93□□□□□ -1.62
CCNFP41002 SNORA63C-201ENST00000364578 129 ntBASIC4.93□□□□□ -1.62
CCNFP41002 SMIM11P1-201ENST00000369586 178 ntBASIC4.93□□□□□ -1.62
CCNFP41002 Y_RNA.422-201ENST00000384054 114 ntBASIC4.93□□□□□ -1.62
CCNFP41002 SNORA70.10-201ENST00000384515 134 ntBASIC4.93□□□□□ -1.62
CCNFP41002 MIR765-201ENST00000390226 114 ntBASIC4.93□□□□□ -1.62
CCNFP41002 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 RN7SKP213-201ENST00000410746 298 ntBASIC4.93□□□□□ -1.62
CCNFP41002 RNU6-387P-201ENST00000411331 105 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AL139095.3-201ENST00000419672 1203 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AL137014.1-201ENST00000420490 1226 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCNFP41002 Z82205.1-201ENST00000428456 297 ntBASIC4.93□□□□□ -1.62
CCNFP41002 MTCO3P45-201ENST00000443036 613 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.93□□□□□ -1.62
CCNFP41002 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNFP41002 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.93□□□□□ -1.62
CCNFP41002 Y_RNA.639-201ENST00000458981 102 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC012158.1-204ENST00000483430 465 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AL163540.1-201ENST00000485382 386 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC004453.1-201ENST00000487895 408 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC010350.1-201ENST00000504908 231 ntBASIC4.93□□□□□ -1.62
CCNFP41002 HMGB3P15-201ENST00000507326 574 ntBASIC4.93□□□□□ -1.62
CCNFP41002 COX6B1P5-201ENST00000509843 249 ntBASIC4.93□□□□□ -1.62
CCNFP41002 RNU6-123P-201ENST00000516163 102 ntBASIC4.93□□□□□ -1.62
CCNFP41002 RN7SKP66-201ENST00000516681 231 ntBASIC4.93□□□□□ -1.62
CCNFP41002 RNU6-256P-201ENST00000516747 97 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC134698.5-201ENST00000519444 336 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNFP41002 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNFP41002 APOOP3-201ENST00000536787 586 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNFP41002 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNFP41002 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCNFP41002 OR1F2P-201ENST00000570470 933 ntBASIC4.93□□□□□ -1.62
CCNFP41002 RPL23AP84-201ENST00000571193 464 ntBASIC4.93□□□□□ -1.62
CCNFP41002 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNFP41002 SNRPGP17-201ENST00000603780 214 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC087783.2-201ENST00000605070 562 ntBASIC4.93□□□□□ -1.62
CCNFP41002 ATP1B3P1-201ENST00000605365 821 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AL355802.3-201ENST00000607571 545 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC022893.3-201ENST00000607665 437 ntBASIC4.93□□□□□ -1.62
CCNFP41002 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCNFP41002 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCNFP41002 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCNFP41002 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNFP41002 AC121333.1-201ENST00000567488 2709 ntBASIC4.93□□□□□ -1.62
CCNFP41002 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCNFP41002 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCNFP41002 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCNFP41002 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.92□□□□□ -1.62
CCNFP41002 AP000542.2-201ENST00000623199 6179 ntBASIC4.92□□□□□ -1.62
CCNFP41002 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.92□□□□□ -1.62
CCNFP41002 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.92□□□□□ -1.62
CCNFP41002 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.92□□□□□ -1.62
CCNFP41002 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.92□□□□□ -1.62
CCNFP41002 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNFP41002 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.92□□□□□ -1.62
CCNFP41002 RNU1-83P-201ENST00000363426 164 ntBASIC4.92□□□□□ -1.62
CCNFP41002 RN7SKP44-201ENST00000363602 316 ntBASIC4.92□□□□□ -1.62
CCNFP41002 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CCNFP41002 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNFP41002 RNU6-1160P-201ENST00000384546 104 ntBASIC4.92□□□□□ -1.62
CCNFP41002 EIF4E2P1-201ENST00000393781 255 ntBASIC4.92□□□□□ -1.62
CCNFP41002 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNFP41002 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.92□□□□□ -1.62
CCNFP41002 AC016712.1-201ENST00000431088 378 ntBASIC4.92□□□□□ -1.62
CCNFP41002 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.92□□□□□ -1.62
CCNFP41002 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNFP41002 RPL21P93-201ENST00000480465 489 ntBASIC4.92□□□□□ -1.62
CCNFP41002 RPS27P27-201ENST00000498779 255 ntBASIC4.92□□□□□ -1.62
CCNFP41002 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.92□□□□□ -1.62
CCNFP41002 RNU6-189P-201ENST00000516120 101 ntBASIC4.92□□□□□ -1.62
CCNFP41002 RNA5SP454-201ENST00000517231 127 ntBASIC4.92□□□□□ -1.62
CCNFP41002 AC100870.1-201ENST00000522035 505 ntBASIC4.92□□□□□ -1.62
CCNFP41002 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.92□□□□□ -1.62
CCNFP41002 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.92□□□□□ -1.62
CCNFP41002 AC008521.1-201ENST00000587471 187 ntBASIC4.92□□□□□ -1.62
CCNFP41002 AL670379.10-201ENST00000604330 253 ntBASIC4.92□□□□□ -1.62
CCNFP41002 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.92□□□□□ -1.62
CCNFP41002 AL670379.9-201ENST00000605428 253 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms