Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 HSFY4P-201ENST00000415994 1181 ntBASIC3.88□□□□□ -1.79
KRT9P35527 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT9P35527 AC245054.1-201ENST00000420944 258 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.88□□□□□ -1.79
KRT9P35527 RPL27AP8-201ENST00000424277 446 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AL512649.1-201ENST00000428997 581 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.88□□□□□ -1.79
KRT9P35527 RPS6P15-201ENST00000431996 751 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT9P35527 TPT1P14-201ENST00000448018 505 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.88□□□□□ -1.79
KRT9P35527 AP1S2P1-201ENST00000457344 379 ntBASIC3.88□□□□□ -1.79
KRT9P35527 BZW1P2-201ENST00000473537 826 ntBASIC3.88□□□□□ -1.79
KRT9P35527 RPS27AP1-201ENST00000475545 471 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC112198.1-201ENST00000505369 1220 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRT9P35527 AC005178.1-201ENST00000508392 440 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT9P35527 MTND1P22-201ENST00000510572 951 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AL359273.1-201ENST00000510918 627 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.88□□□□□ -1.79
KRT9P35527 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRT9P35527 AC011602.1-201ENST00000546484 331 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT9P35527 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.88□□□□□ -1.79
KRT9P35527 OR4T1P-201ENST00000554933 911 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT9P35527 MIR3921-201ENST00000577308 85 ntBASIC3.88□□□□□ -1.79
KRT9P35527 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.88□□□□□ -1.79
KRT9P35527 AC146944.4-201ENST00000602697 718 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC091965.4-201ENST00000607691 587 ntBASIC3.88□□□□□ -1.79
KRT9P35527 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.88□□□□□ -1.79
KRT9P35527 AL603758.1-201ENST00000618654 241 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC139792.2-201ENST00000624218 587 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AL159972.1-201ENST00000625150 448 ntBASIC3.88□□□□□ -1.79
KRT9P35527 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
KRT9P35527 CCT4P2-201ENST00000233836 1548 ntBASIC3.88□□□□□ -1.79
KRT9P35527 RIOK3P1-201ENST00000418778 1528 ntBASIC3.88□□□□□ -1.79
KRT9P35527 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRT9P35527 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRT9P35527 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRT9P35527 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT9P35527 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT9P35527 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRT9P35527 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KRT9P35527 RNU5A-1-201ENST00000362698 116 ntBASIC3.87□□□□□ -1.79
KRT9P35527 Y_RNA.97-201ENST00000363094 102 ntBASIC3.87□□□□□ -1.79
KRT9P35527 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT9P35527 AP002088.1-201ENST00000382740 395 ntBASIC3.87□□□□□ -1.79
KRT9P35527 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KRT9P35527 RNU6-754P-201ENST00000391166 107 ntBASIC3.87□□□□□ -1.79
KRT9P35527 AC109780.2-201ENST00000413467 845 ntBASIC3.87□□□□□ -1.79
KRT9P35527 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT9P35527 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT9P35527 ARF4P2-201ENST00000430209 526 ntBASIC3.87□□□□□ -1.79
KRT9P35527 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT9P35527 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT9P35527 LARP1BP3-201ENST00000437229 869 ntBASIC3.87□□□□□ -1.79
KRT9P35527 TXNP1-201ENST00000441872 371 ntBASIC3.87□□□□□ -1.79
KRT9P35527 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT9P35527 RPS3AP46-201ENST00000448352 682 ntBASIC3.87□□□□□ -1.79
KRT9P35527 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT9P35527 RPL30P6-201ENST00000475925 342 ntBASIC3.87□□□□□ -1.79
KRT9P35527 AC010486.2-201ENST00000505572 483 ntBASIC3.87□□□□□ -1.79
KRT9P35527 HMGN1P11-201ENST00000508668 303 ntBASIC3.87□□□□□ -1.79
KRT9P35527 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT9P35527 AC110768.1-201ENST00000509222 400 ntBASIC3.87□□□□□ -1.79
KRT9P35527 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT9P35527 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT9P35527 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT9P35527 AC106785.1-201ENST00000565935 262 ntBASIC3.87□□□□□ -1.79
KRT9P35527 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT9P35527 ZNF415P1-201ENST00000582279 1166 ntBASIC3.87□□□□□ -1.79
KRT9P35527 MTCYBP22-201ENST00000603788 447 ntBASIC3.87□□□□□ -1.79
KRT9P35527 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT9P35527 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT9P35527 AC091965.5-201ENST00000624785 342 ntBASIC3.87□□□□□ -1.79
KRT9P35527 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT9P35527 AC006927.3-201ENST00000638789 384 ntBASIC3.87□□□□□ -1.79
KRT9P35527 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KRT9P35527 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT9P35527 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT9P35527 AL445523.1-201ENST00000451184 1362 ntBASIC3.87□□□□□ -1.79
KRT9P35527 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRT9P35527 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRT9P35527 AL136164.4-201ENST00000625013 2135 ntBASIC3.86□□□□□ -1.79
KRT9P35527 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
KRT9P35527 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KRT9P35527 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.86□□□□□ -1.79
KRT9P35527 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
KRT9P35527 AC090740.1-201ENST00000623193 2262 ntBASIC3.86□□□□□ -1.79
KRT9P35527 Y_RNA.169-201ENST00000363745 96 ntBASIC3.86□□□□□ -1.79
KRT9P35527 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
KRT9P35527 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.86□□□□□ -1.79
KRT9P35527 AL049545.1-201ENST00000401856 572 ntBASIC3.86□□□□□ -1.79
KRT9P35527 AC007390.1-201ENST00000415722 356 ntBASIC3.86□□□□□ -1.79
KRT9P35527 RPS27AP14-201ENST00000422868 454 ntBASIC3.86□□□□□ -1.79
KRT9P35527 AL365203.2-201ENST00000423444 196 ntBASIC3.86□□□□□ -1.79
KRT9P35527 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.86□□□□□ -1.79
KRT9P35527 SETP5-201ENST00000437270 562 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms