Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC107016.2-201ENST00000547968 190 ntBASIC2.81□□□□□ -1.96
RORAP35398 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.81□□□□□ -1.96
RORAP35398 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.81□□□□□ -1.96
RORAP35398 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.81□□□□□ -1.96
RORAP35398 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.81□□□□□ -1.96
RORAP35398 AL606834.3-201ENST00000602615 496 ntBASIC2.81□□□□□ -1.96
RORAP35398 AL627309.6-201ENST00000606857 840 ntBASIC2.81□□□□□ -1.96
RORAP35398 AC004696.1-201ENST00000614345 607 ntBASIC2.81□□□□□ -1.96
RORAP35398 AC007318.2-201ENST00000620999 243 ntBASIC2.81□□□□□ -1.96
RORAP35398 AP003476.1-201ENST00000623984 516 ntBASIC2.81□□□□□ -1.96
RORAP35398 MKKS-204ENST00000639674 192 ntBASIC2.81□□□□□ -1.96
RORAP35398 AP005901.5-201ENST00000545779 1796 ntBASIC2.81□□□□□ -1.96
RORAP35398 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RORAP35398 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.81□□□□□ -1.96
RORAP35398 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RORAP35398 AC138915.1-201ENST00000565427 1685 ntBASIC2.8□□□□□ -1.96
RORAP35398 Y_RNA.408-201ENST00000383987 102 ntBASIC2.8□□□□□ -1.96
RORAP35398 SNORA46-201ENST00000384762 135 ntBASIC2.8□□□□□ -1.96
RORAP35398 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.8□□□□□ -1.96
RORAP35398 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.8□□□□□ -1.96
RORAP35398 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.8□□□□□ -1.96
RORAP35398 AC236972.1-201ENST00000433225 199 ntBASIC2.8□□□□□ -1.96
RORAP35398 AC092757.1-201ENST00000467293 467 ntBASIC2.8□□□□□ -1.96
RORAP35398 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.8□□□□□ -1.96
RORAP35398 AC098799.2-201ENST00000509466 868 ntBASIC2.8□□□□□ -1.96
RORAP35398 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.8□□□□□ -1.96
RORAP35398 AC091826.1-201ENST00000514065 313 ntBASIC2.8□□□□□ -1.96
RORAP35398 RNU6-1261P-201ENST00000517194 104 ntBASIC2.8□□□□□ -1.96
RORAP35398 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.8□□□□□ -1.96
RORAP35398 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.8□□□□□ -1.96
RORAP35398 OR5G4P-201ENST00000525251 760 ntBASIC2.8□□□□□ -1.96
RORAP35398 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.8□□□□□ -1.96
RORAP35398 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RORAP35398 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.8□□□□□ -1.96
RORAP35398 AC125611.1-201ENST00000549563 229 ntBASIC2.8□□□□□ -1.96
RORAP35398 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.8□□□□□ -1.96
RORAP35398 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.8□□□□□ -1.96
RORAP35398 NBEAP1-201ENST00000554452 979 ntBASIC2.8□□□□□ -1.96
RORAP35398 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.8□□□□□ -1.96
RORAP35398 MED28P6-201ENST00000558776 231 ntBASIC2.8□□□□□ -1.96
RORAP35398 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.8□□□□□ -1.96
RORAP35398 RPL23AP92-201ENST00000603609 255 ntBASIC2.8□□□□□ -1.96
RORAP35398 AL035411.2-201ENST00000604022 421 ntBASIC2.8□□□□□ -1.96
RORAP35398 AC009237.15-201ENST00000610252 501 ntBASIC2.8□□□□□ -1.96
RORAP35398 AC104985.3-201ENST00000623479 597 ntBASIC2.8□□□□□ -1.96
RORAP35398 AC106858.1-201ENST00000637497 429 ntBASIC2.8□□□□□ -1.96
RORAP35398 FAM35BP-202ENST00000497389 3337 ntBASIC2.79□□□□□ -1.96
RORAP35398 OR5J1P-201ENST00000313544 939 ntBASIC2.79□□□□□ -1.96
RORAP35398 SNORD21-201ENST00000383953 95 ntBASIC2.79□□□□□ -1.96
RORAP35398 RNU6-878P-201ENST00000384578 110 ntBASIC2.79□□□□□ -1.96
RORAP35398 RNU6-1176P-201ENST00000390955 107 ntBASIC2.79□□□□□ -1.96
RORAP35398 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.79□□□□□ -1.96
RORAP35398 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.79□□□□□ -1.96
RORAP35398 HMGN2P30-201ENST00000423237 256 ntBASIC2.79□□□□□ -1.96
RORAP35398 EZH2P1-201ENST00000431167 291 ntBASIC2.79□□□□□ -1.96
RORAP35398 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.79□□□□□ -1.96
RORAP35398 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
RORAP35398 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RORAP35398 AC093156.1-201ENST00000440382 670 ntBASIC2.79□□□□□ -1.96
RORAP35398 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.79□□□□□ -1.96
RORAP35398 OR6K5P-201ENST00000447050 945 ntBASIC2.79□□□□□ -1.96
RORAP35398 AL589880.1-201ENST00000448271 287 ntBASIC2.79□□□□□ -1.96
RORAP35398 USP9YP34-201ENST00000453983 808 ntBASIC2.79□□□□□ -1.96
RORAP35398 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.79□□□□□ -1.96
RORAP35398 OR4G11P-201ENST00000492842 939 ntBASIC2.79□□□□□ -1.96
RORAP35398 AC010460.2-201ENST00000509054 677 ntBASIC2.79□□□□□ -1.96
RORAP35398 HIGD1AP13-201ENST00000509878 289 ntBASIC2.79□□□□□ -1.96
RORAP35398 AC010625.1-201ENST00000511296 403 ntBASIC2.79□□□□□ -1.96
RORAP35398 RAC1P5-201ENST00000512182 576 ntBASIC2.79□□□□□ -1.96
RORAP35398 AC026801.2-201ENST00000515352 425 ntBASIC2.79□□□□□ -1.96
RORAP35398 RNU6-1095P-201ENST00000516148 108 ntBASIC2.79□□□□□ -1.96
RORAP35398 SNORA19.3-201ENST00000516165 130 ntBASIC2.79□□□□□ -1.96
RORAP35398 RN7SKP31-201ENST00000516354 278 ntBASIC2.79□□□□□ -1.96
RORAP35398 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RORAP35398 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.79□□□□□ -1.96
RORAP35398 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.79□□□□□ -1.96
RORAP35398 AC125611.2-201ENST00000551907 647 ntBASIC2.79□□□□□ -1.96
RORAP35398 SETP2-201ENST00000553886 926 ntBASIC2.79□□□□□ -1.96
RORAP35398 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.79□□□□□ -1.96
RORAP35398 BNIP3P24-201ENST00000593398 557 ntBASIC2.79□□□□□ -1.96
RORAP35398 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.79□□□□□ -1.96
RORAP35398 AC020895.1-201ENST00000595362 272 ntBASIC2.79□□□□□ -1.96
RORAP35398 BNIP3P31-201ENST00000604515 566 ntBASIC2.79□□□□□ -1.96
RORAP35398 AC019159.1-201ENST00000605094 187 ntBASIC2.79□□□□□ -1.96
RORAP35398 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
RORAP35398 AL158163.2-201ENST00000619110 700 ntBASIC2.79□□□□□ -1.96
RORAP35398 AP003485.1-201ENST00000625093 753 ntBASIC2.79□□□□□ -1.96
RORAP35398 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.79□□□□□ -1.96
RORAP35398 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RORAP35398 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RORAP35398 AC009487.2-201ENST00000420969 6821 ntBASIC2.78□□□□□ -1.96
RORAP35398 AL513185.3-201ENST00000433335 1300 ntBASIC2.78□□□□□ -1.96
RORAP35398 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RORAP35398 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RORAP35398 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RORAP35398 SNORA5B-201ENST00000363786 132 ntBASIC2.78□□□□□ -1.96
RORAP35398 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.78□□□□□ -1.96
RORAP35398 MIR506-201ENST00000384998 124 ntBASIC2.78□□□□□ -1.96
RORAP35398 FO393413.1-201ENST00000402892 195 ntBASIC2.78□□□□□ -1.96
RORAP35398 RAP1BP1-201ENST00000412709 553 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms