Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NANOGP10-201ENST00000453325 895 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AL049714.1-201ENST00000466686 347 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.28□□□□□ -1.72
SLC6A4P31645 HMGN1P28-201ENST00000521340 364 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC6A4P31645 OR4P1P-201ENST00000530808 1136 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AP000857.1-201ENST00000532151 543 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC6A4P31645 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC6A4P31645 RPL21P12-201ENST00000559810 515 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC6A4P31645 MIR4458-201ENST00000578872 75 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC6A4P31645 AL669831.4-202ENST00000590817 238 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AC025449.1-201ENST00000603896 529 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC6A4P31645 AL359314.1-201ENST00000616913 261 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 AC244100.1-202ENST00000621554 382 ntBASIC4.28□□□□□ -1.72
SLC6A4P31645 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC6A4P31645 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SLC6A4P31645 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
SLC6A4P31645 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC6A4P31645 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.28□□□□□ -1.73
SLC6A4P31645 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
SLC6A4P31645 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC6A4P31645 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC6A4P31645 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC6A4P31645 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
SLC6A4P31645 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 RLIMP1-201ENST00000339626 1680 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC6A4P31645 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SLC6A4P31645 RNU1-108P-201ENST00000362556 161 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 U3.11-201ENST00000364476 212 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 Y_RNA.493-201ENST00000384422 102 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 RPS23P10-201ENST00000416185 486 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 AC245054.1-201ENST00000420944 258 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC6A4P31645 MTND4P28-201ENST00000426217 387 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC6A4P31645 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC6A4P31645 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC6A4P31645 RPL21P89-201ENST00000444021 467 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 RPS17P13-201ENST00000448974 407 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 RAD23BP3-201ENST00000454157 1152 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 SNORA40.12-201ENST00000516329 111 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC6A4P31645 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 HMGB3P26-201ENST00000560051 582 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 FGF7P1-201ENST00000582820 288 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 UBE2V2P2-201ENST00000587677 504 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC6A4P31645 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC6A4P31645 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 Z84480.1-201ENST00000605131 311 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 AP003117.2-201ENST00000606010 545 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC6A4P31645 AC064801.1-201ENST00000612025 407 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 AC104260.1-201ENST00000616660 539 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 U73479.1-201ENST00000618062 168 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 YWHAEP7-203ENST00000622054 312 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 AC112484.5-201ENST00000624189 228 ntBASIC4.27□□□□□ -1.73
SLC6A4P31645 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC6A4P31645 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SLC6A4P31645 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC6A4P31645 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC6A4P31645 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SLC6A4P31645 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SLC6A4P31645 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC6A4P31645 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC6A4P31645 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 MTCO1P9-201ENST00000505577 1534 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC6A4P31645 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC6A4P31645 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 ZNF680P1-201ENST00000436625 1469 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC6A4P31645 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC6A4P31645 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC6A4P31645 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 Y_RNA.160-201ENST00000363677 92 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 RNA5SP283-201ENST00000365604 119 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 RNU6-606P-201ENST00000384721 111 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 RNU6-1009P-201ENST00000390996 107 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC108032.1-201ENST00000416706 207 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC005517.2-201ENST00000424673 553 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AL513185.2-201ENST00000425543 193 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms