Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.61□□□□□ -1.67
HOXC12P31275 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC12P31275 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXC12P31275 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXC12P31275 Y_RNA.128-201ENST00000363391 112 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 SNORD116-29-201ENST00000384516 83 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 RNU6-882P-201ENST00000391025 103 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 AL139039.1-201ENST00000401900 692 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 OR4K12P-201ENST00000406538 961 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 RPL37P10-201ENST00000412884 288 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 BX682237.1-201ENST00000415016 335 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.61□□□□□ -1.67
HOXC12P31275 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC12P31275 AP001086.1-201ENST00000494882 321 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 IGBP1P4-201ENST00000503202 879 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 TBCAP3-201ENST00000512475 312 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC12P31275 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 RNU6-352P-201ENST00000516908 107 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 RN7SKP60-201ENST00000516985 239 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.61□□□□□ -1.67
HOXC12P31275 AC135001.1-201ENST00000544546 283 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC12P31275 RN7SL52P-201ENST00000584271 284 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 AC006116.10-201ENST00000591836 581 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC12P31275 AL360085.1-201ENST00000604713 532 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AC087783.2-201ENST00000605070 562 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 ATP1B3P1-201ENST00000605365 821 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AC080078.3-201ENST00000605407 463 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AL627309.6-201ENST00000606857 840 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 U2.17-201ENST00000611454 95 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 AL359547.2-201ENST00000615810 418 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 RN7SL722P-201ENST00000617780 284 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 RN7SL565P-201ENST00000618246 284 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXC12P31275 AC139769.1-204ENST00000472297 1931 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HOXC12P31275 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 AL133243.3-201ENST00000617415 3004 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HOXC12P31275 AC018529.3-201ENST00000624212 2254 ntBASIC4.61□□□□□ -1.67
HOXC12P31275 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
HOXC12P31275 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXC12P31275 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
HOXC12P31275 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HOXC12P31275 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 TLK1P1-201ENST00000456760 2440 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 RN7SKP104-201ENST00000362605 328 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 RNA5SP123-201ENST00000363244 119 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 RN7SKP145-201ENST00000363291 303 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 RNU6-190P-201ENST00000384154 102 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 RNU6-393P-201ENST00000384475 107 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 MIR192-201ENST00000384915 110 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 SNORA48.4-201ENST00000391089 134 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 CISD1P1-201ENST00000393907 327 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 MIR548P-201ENST00000408336 84 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 RPS12P23-201ENST00000419579 400 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 MTND2P23-201ENST00000422990 651 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 BX276092.6-201ENST00000430476 250 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXC12P31275 RPL19P16-201ENST00000433839 588 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC12P31275 AC104058.1-201ENST00000448028 297 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC12P31275 BX276092.8-201ENST00000455722 250 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AC058823.1-201ENST00000485315 474 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXC12P31275 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXC12P31275 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXC12P31275 GMPSP1-201ENST00000514075 579 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXC12P31275 RNU6-327P-201ENST00000516270 127 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 RNU6-677P-201ENST00000516914 101 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 RNA5SP454-201ENST00000517231 127 ntBASIC4.6□□□□□ -1.67
HOXC12P31275 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXC12P31275 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms