Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 Z82209.1-201ENST00000422141 2135 ntBASIC2.59□□□□□ -2
CLIP1P30622 MIR144-201ENST00000384886 86 ntBASIC2.59□□□□□ -2
CLIP1P30622 RFESDP1-201ENST00000422350 461 ntBASIC2.59□□□□□ -2
CLIP1P30622 AL009174.1-201ENST00000426577 416 ntBASIC2.59□□□□□ -2
CLIP1P30622 SUMO1P4-201ENST00000429430 302 ntBASIC2.59□□□□□ -2
CLIP1P30622 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.59□□□□□ -2
CLIP1P30622 AC005912.1-201ENST00000495392 255 ntBASIC2.59□□□□□ -2
CLIP1P30622 RNA5SP364-201ENST00000516938 78 ntBASIC2.59□□□□□ -2
CLIP1P30622 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.59□□□□□ -2
CLIP1P30622 AC007115.1-201ENST00000546853 234 ntBASIC2.59□□□□□ -2
CLIP1P30622 AC234775.3-201ENST00000564612 656 ntBASIC2.59□□□□□ -2
CLIP1P30622 AC024614.2-201ENST00000577584 372 ntBASIC2.59□□□□□ -2
CLIP1P30622 AC010200.2-201ENST00000605098 235 ntBASIC2.59□□□□□ -2
CLIP1P30622 AL135786.2-201ENST00000608422 615 ntBASIC2.59□□□□□ -2
CLIP1P30622 AL512598.1-201ENST00000610158 273 ntBASIC2.59□□□□□ -2
CLIP1P30622 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLIP1P30622 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.58□□□□□ -2
CLIP1P30622 HMGB1P10-201ENST00000395823 563 ntBASIC2.58□□□□□ -2
CLIP1P30622 RPS15AP12-201ENST00000419498 388 ntBASIC2.58□□□□□ -2
CLIP1P30622 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.58□□□□□ -2
CLIP1P30622 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.58□□□□□ -2
CLIP1P30622 CASP3P1-201ENST00000446037 609 ntBASIC2.58□□□□□ -2
CLIP1P30622 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
CLIP1P30622 AMD1P1-201ENST00000457220 922 ntBASIC2.58□□□□□ -2
CLIP1P30622 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.58□□□□□ -2
CLIP1P30622 AC096571.1-202ENST00000506634 735 ntBASIC2.58□□□□□ -2
CLIP1P30622 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.58□□□□□ -2
CLIP1P30622 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.58□□□□□ -2
CLIP1P30622 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLIP1P30622 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.57□□□□□ -2
CLIP1P30622 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CLIP1P30622 MCTS2P-201ENST00000394552 546 ntBASIC2.57□□□□□ -2
CLIP1P30622 AC090096.1-201ENST00000489168 390 ntBASIC2.57□□□□□ -2
CLIP1P30622 RN7SL274P-201ENST00000492268 272 ntBASIC2.57□□□□□ -2
CLIP1P30622 RPL37P25-201ENST00000507308 276 ntBASIC2.57□□□□□ -2
CLIP1P30622 AC109464.2-201ENST00000510242 943 ntBASIC2.57□□□□□ -2
CLIP1P30622 RN7SKP34-201ENST00000516142 244 ntBASIC2.57□□□□□ -2
CLIP1P30622 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.57□□□□□ -2
CLIP1P30622 SMARCE1P4-201ENST00000523647 241 ntBASIC2.57□□□□□ -2
CLIP1P30622 OR4P1P-201ENST00000530808 1136 ntBASIC2.57□□□□□ -2
CLIP1P30622 AL161713.1-201ENST00000555538 145 ntBASIC2.57□□□□□ -2
CLIP1P30622 BX248123.2-201ENST00000606318 124 ntBASIC2.57□□□□□ -2
CLIP1P30622 AL158801.5-201ENST00000623123 465 ntBASIC2.57□□□□□ -2
CLIP1P30622 AC098679.5-201ENST00000624394 571 ntBASIC2.57□□□□□ -2
CLIP1P30622 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.57□□□□□ -2
CLIP1P30622 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.57□□□□□ -2
CLIP1P30622 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.56□□□□□ -2
CLIP1P30622 MIR499A-201ENST00000384903 122 ntBASIC2.56□□□□□ -2
CLIP1P30622 RNU2-17P-201ENST00000410290 190 ntBASIC2.56□□□□□ -2
CLIP1P30622 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.56□□□□□ -2
CLIP1P30622 TRMT112P2-201ENST00000512910 132 ntBASIC2.56□□□□□ -2
CLIP1P30622 RN7SKP82-201ENST00000516786 223 ntBASIC2.56□□□□□ -2
CLIP1P30622 SYF2P1-201ENST00000550658 413 ntBASIC2.56□□□□□ -2
CLIP1P30622 ACTR3BP3-201ENST00000565577 979 ntBASIC2.56□□□□□ -2
CLIP1P30622 MYL12BP1-201ENST00000569826 507 ntBASIC2.56□□□□□ -2
CLIP1P30622 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
CLIP1P30622 AL645939.4-201ENST00000604495 135 ntBASIC2.56□□□□□ -2
CLIP1P30622 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CLIP1P30622 AC131280.1-202ENST00000624067 4211 ntBASIC2.55□□□□□ -2
CLIP1P30622 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.55□□□□□ -2
CLIP1P30622 SNORA31-201ENST00000362607 130 ntBASIC2.55□□□□□ -2
CLIP1P30622 BX510359.4-201ENST00000423750 193 ntBASIC2.55□□□□□ -2
CLIP1P30622 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.55□□□□□ -2
CLIP1P30622 RPL23AP58-201ENST00000440453 469 ntBASIC2.55□□□□□ -2
CLIP1P30622 BX322784.1-201ENST00000455793 1077 ntBASIC2.55□□□□□ -2
CLIP1P30622 RPS29P20-201ENST00000489592 171 ntBASIC2.55□□□□□ -2
CLIP1P30622 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLIP1P30622 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
CLIP1P30622 RN7SKP96-201ENST00000516948 297 ntBASIC2.55□□□□□ -2
CLIP1P30622 AC084851.1-201ENST00000529105 249 ntBASIC2.55□□□□□ -2
CLIP1P30622 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLIP1P30622 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.54□□□□□ -2
CLIP1P30622 RNU4-13P-201ENST00000364019 141 ntBASIC2.54□□□□□ -2
CLIP1P30622 RNU4-52P-201ENST00000384209 138 ntBASIC2.54□□□□□ -2
CLIP1P30622 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
CLIP1P30622 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.54□□□□□ -2
CLIP1P30622 uc_338.5-201ENST00000611839 155 ntBASIC2.54□□□□□ -2
CLIP1P30622 AP000275.1-201ENST00000411943 390 ntBASIC2.53□□□□□ -2
CLIP1P30622 BNIP3P2-201ENST00000441221 577 ntBASIC2.53□□□□□ -2
CLIP1P30622 AC245517.4-201ENST00000448601 281 ntBASIC2.53□□□□□ -2
CLIP1P30622 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.53□□□□□ -2
CLIP1P30622 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.53□□□□□ -2
CLIP1P30622 OR4K8P-201ENST00000578842 1048 ntBASIC2.53□□□□□ -2
CLIP1P30622 MTND5P12-201ENST00000502851 1449 ntBASIC2.53□□□□□ -2
CLIP1P30622 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLIP1P30622 SNORD56.5-201ENST00000364281 72 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 RNU1-57P-201ENST00000384491 166 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 AC004965.1-201ENST00000413033 213 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.52□□□□□ -2.01
CLIP1P30622 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.52□□□□□ -2.01
CLIP1P30622 TAF9P1-201ENST00000445421 515 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 TAF9P2-201ENST00000454958 515 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.52□□□□□ -2.01
CLIP1P30622 MTCO2P9-201ENST00000503214 694 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 SEM1P1-201ENST00000506694 209 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 AC021146.7-201ENST00000509604 775 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.52□□□□□ -2.01
CLIP1P30622 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.52□□□□□ -2.01
CLIP1P30622 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.52□□□□□ -2.01
CLIP1P30622 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms