Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AP001781.1-201ENST00000530977 207 ntBASIC3.88□□□□□ -1.79
TNFSF4P23510 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.88□□□□□ -1.79
TNFSF4P23510 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.88□□□□□ -1.79
TNFSF4P23510 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.88□□□□□ -1.79
TNFSF4P23510 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.88□□□□□ -1.79
TNFSF4P23510 MIR4700-201ENST00000578311 74 ntBASIC3.88□□□□□ -1.79
TNFSF4P23510 MIR4330-201ENST00000579077 105 ntBASIC3.88□□□□□ -1.79
TNFSF4P23510 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TNFSF4P23510 AC104763.2-201ENST00000604179 382 ntBASIC3.88□□□□□ -1.79
TNFSF4P23510 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TNFSF4P23510 AL365204.3-201ENST00000612448 685 ntBASIC3.88□□□□□ -1.79
TNFSF4P23510 AL390240.1-201ENST00000612950 384 ntBASIC3.88□□□□□ -1.79
TNFSF4P23510 AC005609.4-201ENST00000625071 447 ntBASIC3.88□□□□□ -1.79
TNFSF4P23510 LINC00622-201ENST00000562811 1570 ntBASIC3.88□□□□□ -1.79
TNFSF4P23510 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TNFSF4P23510 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TNFSF4P23510 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TNFSF4P23510 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TNFSF4P23510 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TNFSF4P23510 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.87□□□□□ -1.79
TNFSF4P23510 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TNFSF4P23510 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.87□□□□□ -1.79
TNFSF4P23510 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.87□□□□□ -1.79
TNFSF4P23510 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
TNFSF4P23510 MIR448-201ENST00000362131 111 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 Y_RNA.367-201ENST00000365544 101 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 MIR921-201ENST00000401133 56 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 VDAC1P9-201ENST00000412766 841 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 AC009480.2-201ENST00000422916 432 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC091390.3-201ENST00000426478 338 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 MTCO2P19-201ENST00000427513 598 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 DNAJC19P7-201ENST00000428811 344 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 RPL23AP93-201ENST00000440847 484 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.87□□□□□ -1.79
TNFSF4P23510 HSPD1P15-201ENST00000505573 1122 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC116562.3-201ENST00000506136 177 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.87□□□□□ -1.79
TNFSF4P23510 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.87□□□□□ -1.79
TNFSF4P23510 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 SNORD27.1-201ENST00000516319 72 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC068587.5-201ENST00000528506 175 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.87□□□□□ -1.79
TNFSF4P23510 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 AC012507.3-201ENST00000603556 477 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AL391646.1-201ENST00000603860 190 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC007363.1-201ENST00000604736 620 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC007619.2-201ENST00000605743 379 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AL121992.2-201ENST00000606262 256 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC009570.1-201ENST00000609599 745 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC034102.8-201ENST00000615146 484 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 U4.5-201ENST00000617137 123 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AL359880.1-201ENST00000621879 266 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 AC006065.6-201ENST00000625201 545 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 OR5H6-203ENST00000642105 978 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.87□□□□□ -1.79
TNFSF4P23510 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.87□□□□□ -1.79
TNFSF4P23510 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 MTND5P17-201ENST00000418405 1603 ntBASIC3.87□□□□□ -1.79
TNFSF4P23510 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TNFSF4P23510 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.87□□□□□ -1.79
TNFSF4P23510 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TNFSF4P23510 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
TNFSF4P23510 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.86□□□□□ -1.79
TNFSF4P23510 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC007785.2-201ENST00000598627 1916 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFSF4P23510 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
TNFSF4P23510 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFSF4P23510 RNA5SP295-201ENST00000362655 121 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 Y_RNA.159-201ENST00000363674 87 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 RNA5SP505-201ENST00000364748 108 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 RNU6-946P-201ENST00000383878 107 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 MIR181A1-201ENST00000385026 110 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 FAT1P1-201ENST00000406588 507 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 RNU2-33P-201ENST00000410344 192 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 Y_RNA.619-201ENST00000410951 90 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFSF4P23510 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC093106.2-201ENST00000428212 385 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms