Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.67□□□□□ -1.66
SNRPA1P09661 MIR3682-201ENST00000581338 84 ntBASIC4.67□□□□□ -1.66
SNRPA1P09661 AC006116.10-201ENST00000591836 581 ntBASIC4.67□□□□□ -1.66
SNRPA1P09661 CKS1BP3-201ENST00000600888 237 ntBASIC4.67□□□□□ -1.66
SNRPA1P09661 AL359999.1-201ENST00000604513 294 ntBASIC4.67□□□□□ -1.66
SNRPA1P09661 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.67□□□□□ -1.66
SNRPA1P09661 AL445264.1-201ENST00000621719 171 ntBASIC4.67□□□□□ -1.66
SNRPA1P09661 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.67□□□□□ -1.66
SNRPA1P09661 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.67□□□□□ -1.66
SNRPA1P09661 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.67□□□□□ -1.66
SNRPA1P09661 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.67□□□□□ -1.66
SNRPA1P09661 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNRPA1P09661 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNRPA1P09661 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNRPA1P09661 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNRPA1P09661 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNRPA1P09661 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNRPA1P09661 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SNRPA1P09661 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNRPA1P09661 AC073346.2-201ENST00000624724 2058 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNRPA1P09661 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
SNRPA1P09661 AC083843.3-201ENST00000623679 2186 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 GNG5P1-201ENST00000255500 204 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNRPA1P09661 RNU6-1090P-201ENST00000364065 94 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 RNU6-744P-201ENST00000365557 107 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 RNU6-1316P-201ENST00000384242 108 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 RPL30P3-201ENST00000424262 333 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.66□□□□□ -1.66
SNRPA1P09661 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.66□□□□□ -1.66
SNRPA1P09661 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.66□□□□□ -1.66
SNRPA1P09661 RPL23AP74-201ENST00000437246 471 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.66□□□□□ -1.66
SNRPA1P09661 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.66□□□□□ -1.66
SNRPA1P09661 AC010655.1-201ENST00000449336 292 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.66□□□□□ -1.66
SNRPA1P09661 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.66□□□□□ -1.66
SNRPA1P09661 AC069439.1-201ENST00000494739 167 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AC019235.1-201ENST00000503847 207 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.66□□□□□ -1.66
SNRPA1P09661 SNORA70.18-201ENST00000516696 98 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AP001893.2-201ENST00000526949 202 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNRPA1P09661 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.66□□□□□ -1.66
SNRPA1P09661 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.66□□□□□ -1.66
SNRPA1P09661 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.66□□□□□ -1.66
SNRPA1P09661 DUXAP4-201ENST00000603046 613 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AL590282.1-201ENST00000610379 1136 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AC009268.2-201ENST00000621925 457 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AL732618.1-201ENST00000623251 301 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AC005609.4-201ENST00000625071 447 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.66□□□□□ -1.66
SNRPA1P09661 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SNRPA1P09661 AL139811.1-201ENST00000424779 2299 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 AC007390.2-201ENST00000606229 3803 ntBASIC4.66□□□□□ -1.66
SNRPA1P09661 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNRPA1P09661 AC007529.1-201ENST00000418574 2178 ntBASIC4.65□□□□□ -1.66
SNRPA1P09661 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.65□□□□□ -1.66
SNRPA1P09661 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SNRPA1P09661 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.65□□□□□ -1.66
SNRPA1P09661 RNA5SP50-201ENST00000363731 107 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 Y_RNA.409-201ENST00000383990 98 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 RNU6-1226P-201ENST00000384317 107 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.65□□□□□ -1.67
SNRPA1P09661 RN7SKP177-201ENST00000410567 355 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 AC069218.2-201ENST00000411665 344 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.65□□□□□ -1.67
SNRPA1P09661 SAGE2P-201ENST00000420011 2126 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 NANOGP6-201ENST00000429190 847 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 ATP5JP1-201ENST00000431631 322 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 FCF1P1-201ENST00000432690 571 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.65□□□□□ -1.67
SNRPA1P09661 RPS3AP12-201ENST00000443616 753 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 FAM103A2P-201ENST00000444122 354 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.65□□□□□ -1.67
SNRPA1P09661 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.65□□□□□ -1.67
SNRPA1P09661 snoU13.7-201ENST00000459220 104 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 RBM43P1-201ENST00000476891 1081 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 AP001025.2-201ENST00000490908 477 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.65□□□□□ -1.67
SNRPA1P09661 KCTD9P5-201ENST00000504141 1170 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 HMGB1P29-201ENST00000505659 499 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 ARL4AP2-201ENST00000507378 601 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
SNRPA1P09661 OR5AQ1P-201ENST00000527596 927 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.65□□□□□ -1.67
SNRPA1P09661 AC233702.9-201ENST00000581528 203 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.65□□□□□ -1.67
SNRPA1P09661 AL139286.1-201ENST00000604465 483 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 AC080013.4-201ENST00000607624 649 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.65□□□□□ -1.67
SNRPA1P09661 MIR7851-201ENST00000610611 160 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 AC092794.2-201ENST00000620933 563 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.65□□□□□ -1.67
SNRPA1P09661 LRRC77P-213ENST00000637727 880 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SNRPA1P09661 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNRPA1P09661 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms