Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
APOC1P02654 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.1
APOC1P02654 CR848007.1-201ENST00000442354 1699 ntBASIC1.9□□□□□ -2.1
APOC1P02654 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
APOC1P02654 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.9□□□□□ -2.11
APOC1P02654 SNORA68.1-201ENST00000364537 132 ntBASIC1.9□□□□□ -2.11
APOC1P02654 CIR1P3-201ENST00000405137 479 ntBASIC1.9□□□□□ -2.11
APOC1P02654 AL023807.1-201ENST00000407932 359 ntBASIC1.9□□□□□ -2.11
APOC1P02654 RNU6-920P-201ENST00000410926 92 ntBASIC1.9□□□□□ -2.11
APOC1P02654 RNU4-78P-201ENST00000410940 126 ntBASIC1.9□□□□□ -2.11
APOC1P02654 AL135786.1-201ENST00000415892 214 ntBASIC1.9□□□□□ -2.11
APOC1P02654 AC009414.1-201ENST00000427200 443 ntBASIC1.9□□□□□ -2.11
APOC1P02654 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.9□□□□□ -2.11
APOC1P02654 SDCBPP1-201ENST00000440192 890 ntBASIC1.9□□□□□ -2.11
APOC1P02654 OSTCP8-201ENST00000445117 448 ntBASIC1.9□□□□□ -2.11
APOC1P02654 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.9□□□□□ -2.11
APOC1P02654 TPTE2P6-202ENST00000445572 1007 ntBASIC1.9□□□□□ -2.11
APOC1P02654 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.9□□□□□ -2.11
APOC1P02654 AC092155.2-201ENST00000454675 477 ntBASIC1.9□□□□□ -2.11
APOC1P02654 ANKRD26P4-201ENST00000455755 950 ntBASIC1.9□□□□□ -2.11
APOC1P02654 COL6A4P2-205ENST00000509855 506 ntBASIC1.9□□□□□ -2.11
APOC1P02654 SCARNA16.3-201ENST00000516595 184 ntBASIC1.9□□□□□ -2.11
APOC1P02654 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
APOC1P02654 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.9□□□□□ -2.11
APOC1P02654 OR11H5P-201ENST00000554039 926 ntBASIC1.9□□□□□ -2.11
APOC1P02654 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
APOC1P02654 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.9□□□□□ -2.11
APOC1P02654 AL390838.2-201ENST00000602394 274 ntBASIC1.9□□□□□ -2.11
APOC1P02654 XIAPP1-201ENST00000603162 600 ntBASIC1.9□□□□□ -2.11
APOC1P02654 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
APOC1P02654 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.9□□□□□ -2.11
APOC1P02654 AP001486.3-201ENST00000615334 372 ntBASIC1.9□□□□□ -2.11
APOC1P02654 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.9□□□□□ -2.11
APOC1P02654 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
APOC1P02654 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.9□□□□□ -2.11
APOC1P02654 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
APOC1P02654 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.9□□□□□ -2.11
APOC1P02654 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
APOC1P02654 AC046144.1-201ENST00000478559 1853 ntBASIC1.9□□□□□ -2.11
APOC1P02654 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
APOC1P02654 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.89□□□□□ -2.11
APOC1P02654 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.89□□□□□ -2.11
APOC1P02654 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.89□□□□□ -2.11
APOC1P02654 SDR42E1P3-201ENST00000438345 502 ntBASIC1.89□□□□□ -2.11
APOC1P02654 AL157827.1-201ENST00000447622 132 ntBASIC1.89□□□□□ -2.11
APOC1P02654 AL359385.1-201ENST00000456509 365 ntBASIC1.89□□□□□ -2.11
APOC1P02654 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
APOC1P02654 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.89□□□□□ -2.11
APOC1P02654 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.89□□□□□ -2.11
APOC1P02654 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.89□□□□□ -2.11
APOC1P02654 AC087276.1-201ENST00000529659 480 ntBASIC1.89□□□□□ -2.11
APOC1P02654 SNRPGP16-201ENST00000533275 226 ntBASIC1.89□□□□□ -2.11
APOC1P02654 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.89□□□□□ -2.11
APOC1P02654 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
APOC1P02654 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.89□□□□□ -2.11
APOC1P02654 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.89□□□□□ -2.11
APOC1P02654 AC079089.3-201ENST00000603094 673 ntBASIC1.89□□□□□ -2.11
APOC1P02654 AP004247.3-201ENST00000608682 624 ntBASIC1.89□□□□□ -2.11
APOC1P02654 OR10AB1P-201ENST00000609613 938 ntBASIC1.89□□□□□ -2.11
APOC1P02654 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.89□□□□□ -2.11
APOC1P02654 SDAD1P2-201ENST00000441308 2028 ntBASIC1.89□□□□□ -2.11
APOC1P02654 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.89□□□□□ -2.11
APOC1P02654 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
APOC1P02654 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
APOC1P02654 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
APOC1P02654 U3.29-201ENST00000391296 212 ntBASIC1.88□□□□□ -2.11
APOC1P02654 RNA5SP80-201ENST00000410475 111 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.88□□□□□ -2.11
APOC1P02654 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC009963.1-201ENST00000417265 157 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.88□□□□□ -2.11
APOC1P02654 AL139413.1-201ENST00000421309 217 ntBASIC1.88□□□□□ -2.11
APOC1P02654 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.88□□□□□ -2.11
APOC1P02654 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
APOC1P02654 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.88□□□□□ -2.11
APOC1P02654 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.88□□□□□ -2.11
APOC1P02654 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.88□□□□□ -2.11
APOC1P02654 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.88□□□□□ -2.11
APOC1P02654 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.88□□□□□ -2.11
APOC1P02654 TRGVB-201ENST00000453257 471 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.88□□□□□ -2.11
APOC1P02654 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.88□□□□□ -2.11
APOC1P02654 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.88□□□□□ -2.11
APOC1P02654 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.88□□□□□ -2.11
APOC1P02654 AP003122.3-201ENST00000526316 255 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC026464.5-201ENST00000562497 722 ntBASIC1.88□□□□□ -2.11
APOC1P02654 MIR3609-201ENST00000582661 80 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
APOC1P02654 AC025594.3-201ENST00000613068 790 ntBASIC1.88□□□□□ -2.11
APOC1P02654 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
APOC1P02654 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AL160394.1-201ENST00000624765 724 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC097372.4-201ENST00000625025 466 ntBASIC1.88□□□□□ -2.11
APOC1P02654 AC243829.7-201ENST00000633081 225 ntBASIC1.88□□□□□ -2.11
APOC1P02654 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
APOC1P02654 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
APOC1P02654 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.88□□□□□ -2.11
APOC1P02654 RNU6-525P-201ENST00000363685 104 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms