Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.48□□□□□ -1.69
CDKL5O76039 AC084198.1-201ENST00000477747 402 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AC007182.2-201ENST00000489251 402 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 NIPA2P2-201ENST00000496376 1083 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.48□□□□□ -1.69
CDKL5O76039 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 Y_RNA.672-201ENST00000516289 104 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.48□□□□□ -1.69
CDKL5O76039 SUMO2P20-201ENST00000520803 283 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.48□□□□□ -1.69
CDKL5O76039 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.48□□□□□ -1.69
CDKL5O76039 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.48□□□□□ -1.69
CDKL5O76039 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.48□□□□□ -1.69
CDKL5O76039 AL845331.3-202ENST00000562856 261 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AL360157.1-201ENST00000565962 87 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AC034268.2-201ENST00000571784 482 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.48□□□□□ -1.69
CDKL5O76039 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 AC005255.1-201ENST00000593748 216 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 AL121757.2-201ENST00000611223 313 ntBASIC4.48□□□□□ -1.69
CDKL5O76039 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CDKL5O76039 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDKL5O76039 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDKL5O76039 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDKL5O76039 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.48□□□□□ -1.69
CDKL5O76039 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDKL5O76039 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 HSPA8P1-201ENST00000425843 1833 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 OR5J1P-201ENST00000313544 939 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 RNU6-282P-201ENST00000365357 103 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 RNU6-877P-201ENST00000383868 107 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 RNU6-441P-201ENST00000384545 106 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 RPL7P25-201ENST00000404151 721 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AL356776.1-201ENST00000406574 447 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 RAB28P1-201ENST00000411517 641 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 MTND3P17-201ENST00000416968 344 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AC133104.1-201ENST00000429100 218 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 OR4C10P-201ENST00000434991 931 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.47□□□□□ -1.69
CDKL5O76039 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 AC132479.1-201ENST00000449160 144 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 HMGN1P12-201ENST00000499125 195 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AC114967.1-201ENST00000504890 259 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AC018710.1-201ENST00000506509 158 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDKL5O76039 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDKL5O76039 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 AL606490.9-201ENST00000603331 271 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AL137849.1-201ENST00000604767 169 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AL035413.2-201ENST00000604801 525 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.47□□□□□ -1.69
CDKL5O76039 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 AL713922.2-201ENST00000619384 716 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AC139792.3-201ENST00000623525 224 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AP003122.6-201ENST00000623831 495 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AL359697.1-201ENST00000624879 587 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 MIR3662-201ENST00000637030 95 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CDKL5O76039 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDKL5O76039 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDKL5O76039 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDKL5O76039 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDKL5O76039 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDKL5O76039 AC092079.1-201ENST00000558620 1985 ntBASIC4.47□□□□□ -1.69
CDKL5O76039 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDKL5O76039 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.46□□□□□ -1.69
CDKL5O76039 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CDKL5O76039 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDKL5O76039 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.46□□□□□ -1.7
CDKL5O76039 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.46□□□□□ -1.7
CDKL5O76039 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDKL5O76039 MIR372-201ENST00000362225 67 ntBASIC4.46□□□□□ -1.7
CDKL5O76039 Y_RNA.46-201ENST00000362695 102 ntBASIC4.46□□□□□ -1.7
CDKL5O76039 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDKL5O76039 MIR649-201ENST00000384843 97 ntBASIC4.46□□□□□ -1.7
CDKL5O76039 AC016769.3-201ENST00000396562 315 ntBASIC4.46□□□□□ -1.7
CDKL5O76039 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.46□□□□□ -1.7
CDKL5O76039 AL353193.1-201ENST00000421444 268 ntBASIC4.46□□□□□ -1.7
CDKL5O76039 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms