Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AL590396.2-201ENST00000636511 1041 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NPHP4O75161 MTND5P3-201ENST00000438536 1800 ntBASIC2.94□□□□□ -1.94
NPHP4O75161 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPHP4O75161 AL139276.1-201ENST00000311910 1001 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 DEFA7P-201ENST00000382676 285 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 SNORA40.18-201ENST00000391200 128 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP4O75161 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP4O75161 RPL36P19-201ENST00000430744 301 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 MTND5P8-201ENST00000449817 1083 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 FABP5P13-201ENST00000452144 328 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 NCOR1P1-202ENST00000486162 291 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 TBCAP3-201ENST00000512475 312 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 RNU6-826P-201ENST00000516827 104 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP4O75161 CENPUP2-201ENST00000555897 1186 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP4O75161 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NPHP4O75161 AC025918.2-201ENST00000558683 763 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC008687.2-201ENST00000597865 520 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC079610.2-201ENST00000604818 690 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC135178.6-201ENST00000605314 398 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NPHP4O75161 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP4O75161 MIR1264-201ENST00000616374 69 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP4O75161 RNA5SP190-201ENST00000365222 118 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP4O75161 AC019129.1-201ENST00000403786 261 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP4O75161 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP4O75161 MORF4L1P7-201ENST00000426038 703 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP4O75161 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NPHP4O75161 AC092685.1-201ENST00000447960 1243 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AL513343.1-201ENST00000451818 792 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 snoU13.18-201ENST00000459483 104 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC108729.2-201ENST00000476543 840 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 RPL23AP63-201ENST00000498752 471 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NPHP4O75161 HMGB3P15-201ENST00000507326 574 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 TMEM248P1-201ENST00000510579 951 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC083923.1-201ENST00000523708 376 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP4O75161 OR6C73P-201ENST00000546432 358 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.93□□□□□ -1.94
NPHP4O75161 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHP4O75161 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.93□□□□□ -1.94
NPHP4O75161 AC012254.4-201ENST00000588843 273 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AL450270.1-201ENST00000606160 391 ntBASIC2.93□□□□□ -1.94
NPHP4O75161 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHP4O75161 MTND4P35-201ENST00000604257 1375 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPHP4O75161 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPHP4O75161 SNORA31-201ENST00000362607 130 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 Y_RNA.122-201ENST00000363331 96 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP4O75161 AC005517.2-201ENST00000424673 553 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP4O75161 RPL23AP76-201ENST00000441860 458 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 Z77249.1-201ENST00000444622 1175 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.92□□□□□ -1.94
NPHP4O75161 AC092754.2-201ENST00000463506 460 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 AC146507.1-201ENST00000468335 354 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 AL163540.1-201ENST00000485382 386 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.92□□□□□ -1.94
NPHP4O75161 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.92□□□□□ -1.94
NPHP4O75161 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NPHP4O75161 SNORA31.26-201ENST00000517250 137 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP4O75161 AP003717.3-201ENST00000544832 1180 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 MIR3683-201ENST00000580847 82 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP4O75161 Y_RNA.783-201ENST00000613546 102 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.92□□□□□ -1.94
NPHP4O75161 AC083865.1-201ENST00000636634 831 ntBASIC2.92□□□□□ -1.94
NPHP4O75161 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.91□□□□□ -1.94
NPHP4O75161 MIR6073-201ENST00000352083 89 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NPHP4O75161 RNU4-62P-201ENST00000410125 130 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 AP1B1P2-201ENST00000416196 106 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NPHP4O75161 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.91□□□□□ -1.94
NPHP4O75161 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.91□□□□□ -1.94
NPHP4O75161 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.91□□□□□ -1.94
NPHP4O75161 RPS26P21-201ENST00000475397 348 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 AC078918.1-201ENST00000498515 228 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 TRMT112P2-201ENST00000512910 132 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 AC104115.2-201ENST00000523026 687 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.91□□□□□ -1.94
NPHP4O75161 AMZ2P1-203ENST00000565833 850 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 MIR4504-201ENST00000577413 92 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 AC024595.1-201ENST00000623088 387 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.91□□□□□ -1.94
NPHP4O75161 AL157700.1-201ENST00000561973 1432 ntBASIC2.91□□□□□ -1.94
NPHP4O75161 ENSAP3-201ENST00000312710 333 ntBASIC2.9□□□□□ -1.95
NPHP4O75161 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NPHP4O75161 RNA5SP189-201ENST00000364920 115 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms