Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX4O60224 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX4O60224 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
SSX4O60224 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SSX4O60224 SNORA71.3-201ENST00000362582 128 ntBASIC3.39□□□□□ -1.87
SSX4O60224 RNA5SP97-201ENST00000365006 84 ntBASIC3.39□□□□□ -1.87
SSX4O60224 RNU5E-5P-201ENST00000365379 116 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
SSX4O60224 RNU6-637P-201ENST00000384050 107 ntBASIC3.39□□□□□ -1.87
SSX4O60224 RNU6-213P-201ENST00000384051 104 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AL136372.1-201ENST00000403060 228 ntBASIC3.39□□□□□ -1.87
SSX4O60224 RN7SKP156-201ENST00000410308 342 ntBASIC3.39□□□□□ -1.87
SSX4O60224 CRYBB2P1-203ENST00000415709 538 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.39□□□□□ -1.87
SSX4O60224 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.39□□□□□ -1.87
SSX4O60224 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX4O60224 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX4O60224 AC024082.2-201ENST00000434771 238 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX4O60224 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.39□□□□□ -1.87
SSX4O60224 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
SSX4O60224 TPT1P14-201ENST00000448018 505 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AL590365.1-201ENST00000450788 243 ntBASIC3.39□□□□□ -1.87
SSX4O60224 SNRPGP9-201ENST00000456025 225 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AL122001.1-201ENST00000457027 370 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AC068724.1-201ENST00000487100 792 ntBASIC3.39□□□□□ -1.87
SSX4O60224 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX4O60224 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.39□□□□□ -1.87
SSX4O60224 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AC026801.2-201ENST00000515352 425 ntBASIC3.39□□□□□ -1.87
SSX4O60224 PAICSP4-201ENST00000517543 1253 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AC008489.1-201ENST00000524271 483 ntBASIC3.39□□□□□ -1.87
SSX4O60224 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX4O60224 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX4O60224 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX4O60224 AC091516.1-201ENST00000549191 703 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX4O60224 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX4O60224 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.39□□□□□ -1.87
SSX4O60224 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX4O60224 AC239868.4-201ENST00000608318 671 ntBASIC3.39□□□□□ -1.87
SSX4O60224 OR10AB1P-201ENST00000609613 938 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AC006023.2-201ENST00000609916 167 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AL121772.2-201ENST00000614331 297 ntBASIC3.39□□□□□ -1.87
SSX4O60224 MIR8058-201ENST00000615737 89 ntBASIC3.39□□□□□ -1.87
SSX4O60224 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX4O60224 AC009268.2-201ENST00000621925 457 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
SSX4O60224 AC025048.6-202ENST00000627667 438 ntBASIC3.39□□□□□ -1.87
SSX4O60224 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX4O60224 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.39□□□□□ -1.87
SSX4O60224 AC012442.3-202ENST00000636742 206 ntBASIC3.39□□□□□ -1.87
SSX4O60224 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 AC009812.4-201ENST00000569134 1805 ntBASIC3.39□□□□□ -1.87
SSX4O60224 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX4O60224 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX4O60224 AC116096.1-201ENST00000566804 2314 ntBASIC3.38□□□□□ -1.87
SSX4O60224 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSX4O60224 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSX4O60224 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSX4O60224 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSX4O60224 RNA5SP124-201ENST00000362739 110 ntBASIC3.38□□□□□ -1.87
SSX4O60224 SNORD46.1-201ENST00000364139 104 ntBASIC3.38□□□□□ -1.87
SSX4O60224 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
SSX4O60224 RNU4-40P-201ENST00000364351 143 ntBASIC3.38□□□□□ -1.87
SSX4O60224 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SSX4O60224 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.38□□□□□ -1.87
SSX4O60224 MIR449B-201ENST00000384995 97 ntBASIC3.38□□□□□ -1.87
SSX4O60224 MTHFD2P2-201ENST00000407725 247 ntBASIC3.38□□□□□ -1.87
SSX4O60224 RNU6-516P-201ENST00000411381 104 ntBASIC3.38□□□□□ -1.87
SSX4O60224 MTND1P21-201ENST00000412991 285 ntBASIC3.38□□□□□ -1.87
SSX4O60224 RPL7AP73-201ENST00000413490 353 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AL365338.1-201ENST00000422282 858 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AC233728.2-201ENST00000425348 757 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AL356583.2-201ENST00000426536 280 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.38□□□□□ -1.87
SSX4O60224 AC090774.1-201ENST00000435925 246 ntBASIC3.38□□□□□ -1.87
SSX4O60224 FTH1P1-201ENST00000437933 532 ntBASIC3.38□□□□□ -1.87
SSX4O60224 CYCSP43-201ENST00000438233 310 ntBASIC3.38□□□□□ -1.87
SSX4O60224 RPL22P17-201ENST00000438729 315 ntBASIC3.38□□□□□ -1.87
SSX4O60224 NOTCH2P1-201ENST00000443481 624 ntBASIC3.38□□□□□ -1.87
SSX4O60224 COX6CP2-201ENST00000444980 225 ntBASIC3.38□□□□□ -1.87
SSX4O60224 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.38□□□□□ -1.87
SSX4O60224 DNAJC19P1-201ENST00000455312 319 ntBASIC3.38□□□□□ -1.87
SSX4O60224 RPL31P3-201ENST00000458430 332 ntBASIC3.38□□□□□ -1.87
SSX4O60224 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.38□□□□□ -1.87
SSX4O60224 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.38□□□□□ -1.87
SSX4O60224 AC055855.1-201ENST00000489563 579 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.38□□□□□ -1.87
SSX4O60224 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms