Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.37□□□□□ -2.03
SGCEO43556 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.37□□□□□ -2.03
SGCEO43556 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 AL096803.2-201ENST00000450032 677 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AC135721.1-201ENST00000497954 479 ntBASIC2.37□□□□□ -2.03
SGCEO43556 KLRA1P-201ENST00000503499 986 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.37□□□□□ -2.03
SGCEO43556 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.37□□□□□ -2.03
SGCEO43556 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.37□□□□□ -2.03
SGCEO43556 CDC42P4-201ENST00000510507 563 ntBASIC2.37□□□□□ -2.03
SGCEO43556 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
SGCEO43556 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.37□□□□□ -2.03
SGCEO43556 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.37□□□□□ -2.03
SGCEO43556 CYCSP39-201ENST00000565821 309 ntBASIC2.37□□□□□ -2.03
SGCEO43556 MTCO1P40-201ENST00000574371 625 ntBASIC2.37□□□□□ -2.03
SGCEO43556 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.37□□□□□ -2.03
SGCEO43556 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 BNIP3P22-201ENST00000593399 556 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.37□□□□□ -2.03
SGCEO43556 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AC011330.2-201ENST00000621680 635 ntBASIC2.37□□□□□ -2.03
SGCEO43556 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.37□□□□□ -2.03
SGCEO43556 CR381653.2-201ENST00000624041 768 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AL137790.1-201ENST00000634283 177 ntBASIC2.37□□□□□ -2.03
SGCEO43556 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SGCEO43556 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SGCEO43556 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.37□□□□□ -2.03
SGCEO43556 AC135776.4-201ENST00000624300 1904 ntBASIC2.36□□□□□ -2.03
SGCEO43556 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
SGCEO43556 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AL592148.1-201ENST00000413568 445 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.36□□□□□ -2.03
SGCEO43556 AC112220.1-201ENST00000434628 355 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC234064.1-201ENST00000436312 247 ntBASIC2.36□□□□□ -2.03
SGCEO43556 MRPL50P4-201ENST00000446432 475 ntBASIC2.36□□□□□ -2.03
SGCEO43556 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.36□□□□□ -2.03
SGCEO43556 RPL7P55-201ENST00000450522 746 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.36□□□□□ -2.03
SGCEO43556 MTND4LP3-201ENST00000468320 276 ntBASIC2.36□□□□□ -2.03
SGCEO43556 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.36□□□□□ -2.03
SGCEO43556 RPL23AP70-201ENST00000483361 460 ntBASIC2.36□□□□□ -2.03
SGCEO43556 NAMPTP2-201ENST00000505629 1115 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC008716.1-201ENST00000511084 513 ntBASIC2.36□□□□□ -2.03
SGCEO43556 RNU6-885P-201ENST00000516607 104 ntBASIC2.36□□□□□ -2.03
SGCEO43556 RNU6-798P-201ENST00000516912 103 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.36□□□□□ -2.03
SGCEO43556 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.36□□□□□ -2.03
SGCEO43556 CR383656.7-201ENST00000548164 174 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC007954.1-201ENST00000554198 494 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AL355836.1-201ENST00000555951 870 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AMZ2P1-203ENST00000565833 850 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.36□□□□□ -2.03
SGCEO43556 MYL12BP1-201ENST00000569826 507 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.36□□□□□ -2.03
SGCEO43556 AC105224.1-201ENST00000587055 421 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC245517.5-201ENST00000611529 162 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.36□□□□□ -2.03
SGCEO43556 UCA1.1-201ENST00000620952 75 ntBASIC2.36□□□□□ -2.03
SGCEO43556 AC026634.1-201ENST00000634369 198 ntBASIC2.36□□□□□ -2.03
SGCEO43556 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SGCEO43556 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.35□□□□□ -2.03
SGCEO43556 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.35□□□□□ -2.03
SGCEO43556 SET-203ENST00000372688 801 ntTSL 2 BASIC2.35□□□□□ -2.03
SGCEO43556 AL035405.1-201ENST00000400795 710 ntBASIC2.35□□□□□ -2.03
SGCEO43556 RNU2-43P-201ENST00000410306 190 ntBASIC2.35□□□□□ -2.03
SGCEO43556 RNU2-47P-201ENST00000410649 186 ntBASIC2.35□□□□□ -2.03
SGCEO43556 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.35□□□□□ -2.03
SGCEO43556 AC080125.1-201ENST00000414888 684 ntBASIC2.35□□□□□ -2.03
SGCEO43556 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.35□□□□□ -2.03
SGCEO43556 RPL7P44-201ENST00000424827 742 ntBASIC2.35□□□□□ -2.03
SGCEO43556 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.35□□□□□ -2.03
SGCEO43556 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.35□□□□□ -2.03
SGCEO43556 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.35□□□□□ -2.03
SGCEO43556 RPL31P41-201ENST00000477967 372 ntBASIC2.35□□□□□ -2.03
SGCEO43556 SETP6-201ENST00000479329 568 ntBASIC2.35□□□□□ -2.03
SGCEO43556 RPS15AP34-201ENST00000487776 387 ntBASIC2.35□□□□□ -2.03
SGCEO43556 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.35□□□□□ -2.03
SGCEO43556 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.35□□□□□ -2.03
SGCEO43556 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.35□□□□□ -2.03
SGCEO43556 RNU5A-7P-201ENST00000515979 116 ntBASIC2.35□□□□□ -2.03
SGCEO43556 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
SGCEO43556 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
SGCEO43556 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.35□□□□□ -2.03
SGCEO43556 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.35□□□□□ -2.03
SGCEO43556 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.35□□□□□ -2.03
SGCEO43556 AP001317.1-201ENST00000531194 960 ntBASIC2.35□□□□□ -2.03
SGCEO43556 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.35□□□□□ -2.03
SGCEO43556 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.35□□□□□ -2.03
SGCEO43556 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.35□□□□□ -2.03
SGCEO43556 AC074050.1-201ENST00000563247 211 ntBASIC2.35□□□□□ -2.03
SGCEO43556 MIR3200-201ENST00000580767 85 ntBASIC2.35□□□□□ -2.03
SGCEO43556 AC090616.3-201ENST00000582184 217 ntBASIC2.35□□□□□ -2.03
SGCEO43556 MIR4635-201ENST00000583759 79 ntBASIC2.35□□□□□ -2.03
SGCEO43556 AC002487.1-201ENST00000604565 994 ntBASIC2.35□□□□□ -2.03
SGCEO43556 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SGCEO43556 AC135507.2-201ENST00000612443 309 ntBASIC2.35□□□□□ -2.03
SGCEO43556 AC079597.1-201ENST00000624306 508 ntBASIC2.35□□□□□ -2.03
SGCEO43556 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.35□□□□□ -2.03
SGCEO43556 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms