Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN1O15353 AC069304.2-201ENST00000605154 435 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AC104010.1-201ENST00000616889 150 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 YWHAEP7-203ENST00000622054 312 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN1O15353 MTND5P42-201ENST00000637720 498 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 MKKS-204ENST00000639674 192 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN1O15353 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXN1O15353 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN1O15353 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
FOXN1O15353 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXN1O15353 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 Y_RNA.1-201ENST00000352915 104 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 Y_RNA.86-201ENST00000363020 111 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 RNU6-1085P-201ENST00000363576 107 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 ARF4P3-201ENST00000397387 509 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AL121834.1-202ENST00000404494 277 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 SNORA3C-201ENST00000408792 125 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 OR51A3P-201ENST00000413596 924 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 JKAMPP1-201ENST00000413804 919 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 HMGB3P20-201ENST00000417997 600 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXN1O15353 COTL1P1-201ENST00000422309 375 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 NANOGP6-201ENST00000429190 847 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AC011742.1-201ENST00000431448 434 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AC069285.2-201ENST00000440210 275 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN1O15353 MTCYBP6-201ENST00000441810 138 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN1O15353 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN1O15353 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
FOXN1O15353 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN1O15353 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN1O15353 HMGB1P28-201ENST00000507778 552 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXN1O15353 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXN1O15353 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.6□□□□□ -1.67
FOXN1O15353 RNU6-1045P-201ENST00000516321 107 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXN1O15353 AC107954.1-201ENST00000565906 727 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXN1O15353 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXN1O15353 PRELID3BP8-201ENST00000604148 295 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AC091167.4-201ENST00000605079 184 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AL160413.1-201ENST00000622780 310 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXN1O15353 AC110994.2-201ENST00000635481 492 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
FOXN1O15353 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 CDR1-202ENST00000625883 1485 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
FOXN1O15353 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 AL133383.2-201ENST00000622958 2336 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 AC097504.1-201ENST00000515103 2415 ntBASIC4.6□□□□□ -1.67
FOXN1O15353 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXN1O15353 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXN1O15353 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXN1O15353 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
FOXN1O15353 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXN1O15353 Y_RNA.58-201ENST00000362807 102 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RNU4-44P-201ENST00000363050 141 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 Y_RNA.154-201ENST00000363624 102 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RNA5SP97-201ENST00000365006 84 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RNY3P1-201ENST00000365085 102 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RNY3-201ENST00000365484 102 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXN1O15353 U1.1-201ENST00000384101 164 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 Y_RNA.490-201ENST00000384413 102 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RNU6-225P-201ENST00000384613 103 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 U8.14-201ENST00000390843 143 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RNA5SP104-201ENST00000410989 118 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 BX890604.2-201ENST00000427883 474 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 AC005300.1-201ENST00000428401 373 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 AL513175.1-201ENST00000431492 780 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 FCF1P1-201ENST00000432690 571 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN1O15353 NPM1P39-201ENST00000449818 867 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXN1O15353 AL590365.1-201ENST00000450788 243 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RPL18AP17-201ENST00000455326 198 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 AC023598.1-201ENST00000472521 361 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RPS26P15-201ENST00000488067 348 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 RPL39P36-201ENST00000490784 156 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXN1O15353 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 AC008127.2-201ENST00000549925 1075 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 TRAV15-201ENST00000556680 249 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 NCAPGP2-201ENST00000557911 754 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 AC138915.3-201ENST00000562908 1389 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXN1O15353 MIR4672-201ENST00000583126 81 ntBASIC4.59□□□□□ -1.67
FOXN1O15353 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms