Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGN4O00479 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGN4O00479 AC096992.1-201ENST00000459808 709 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AC010285.1-201ENST00000470580 392 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 UBL5P3-201ENST00000475112 231 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AC068587.2-201ENST00000478386 781 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMGN4O00479 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.6□□□□□ -2.15
HMGN4O00479 AC105914.1-201ENST00000511798 226 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AC006499.2-201ENST00000513470 337 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AC087808.1-201ENST00000520501 361 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGN4O00479 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGN4O00479 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
HMGN4O00479 RANP3-201ENST00000530970 276 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AP003717.3-201ENST00000544832 1180 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGN4O00479 AC013444.2-201ENST00000603317 787 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AC024023.1-201ENST00000624530 922 ntBASIC1.6□□□□□ -2.15
HMGN4O00479 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGN4O00479 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGN4O00479 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
HMGN4O00479 ZNF37BP-203ENST00000452306 1352 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.59□□□□□ -2.15
HMGN4O00479 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
HMGN4O00479 SNORA40.18-201ENST00000391200 128 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.59□□□□□ -2.15
HMGN4O00479 AL450338.1-201ENST00000407987 512 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 RNA5SP498-201ENST00000411342 120 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 AC096533.1-201ENST00000411645 353 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 AC096632.1-201ENST00000427395 310 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGN4O00479 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.59□□□□□ -2.15
HMGN4O00479 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGN4O00479 AL031183.1-201ENST00000457667 207 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 SYPL1P1-201ENST00000473622 768 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 RBM43P1-201ENST00000476891 1081 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 RAC1P5-201ENST00000512182 576 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGN4O00479 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGN4O00479 COX6CP3-201ENST00000580869 223 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGN4O00479 AC093673.2-201ENST00000609674 331 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 AC022031.1-201ENST00000585985 2593 ntBASIC1.59□□□□□ -2.15
HMGN4O00479 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
HMGN4O00479 AL109809.4-201ENST00000603520 2185 ntBASIC1.59□□□□□ -2.16
HMGN4O00479 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.59□□□□□ -2.16
HMGN4O00479 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
HMGN4O00479 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
HMGN4O00479 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.59□□□□□ -2.16
HMGN4O00479 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
HMGN4O00479 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMGN4O00479 RNA5SP126-201ENST00000365092 109 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 MIR583-201ENST00000384846 75 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 TAS2R15P-201ENST00000390674 928 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 AC244033.1-201ENST00000426826 870 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.58□□□□□ -2.16
HMGN4O00479 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.58□□□□□ -2.16
HMGN4O00479 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGN4O00479 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.58□□□□□ -2.16
HMGN4O00479 AC079203.1-201ENST00000487972 404 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 MTND4P2-201ENST00000507767 1203 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMGN4O00479 SUB1P1-201ENST00000524415 382 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 AP000867.2-201ENST00000532468 320 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.58□□□□□ -2.16
HMGN4O00479 GLUD1P4-201ENST00000590914 418 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 U73023.1-201ENST00000603134 700 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 MIR6840-201ENST00000611937 71 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 U73479.1-201ENST00000618062 168 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
HMGN4O00479 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.58□□□□□ -2.16
HMGN4O00479 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMGN4O00479 AC011460.1-201ENST00000636268 1834 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HMGN4O00479 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HMGN4O00479 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HMGN4O00479 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HMGN4O00479 U8.13-201ENST00000390842 128 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HMGN4O00479 RNU6-1140P-201ENST00000410517 106 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 AL030996.1-201ENST00000411430 235 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 AL357078.2-201ENST00000416486 427 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 NPM1P11-201ENST00000417106 855 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.57□□□□□ -2.16
HMGN4O00479 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 RPL7P37-201ENST00000425095 738 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGN4O00479 Z77249.1-201ENST00000444622 1175 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 AC011753.1-201ENST00000451001 220 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HMGN4O00479 AC034222.1-201ENST00000494052 532 ntBASIC1.57□□□□□ -2.16
HMGN4O00479 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.57□□□□□ -2.16
HMGN4O00479 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.57□□□□□ -2.16
HMGN4O00479 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGN4O00479 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.57□□□□□ -2.16
HMGN4O00479 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGN4O00479 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.57□□□□□ -2.16
HMGN4O00479 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms