Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MTCO1P39-201ENST00000426148 480 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 AC091390.3-201ENST00000426478 338 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 ARL5AP4-201ENST00000430731 512 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.38□□□□□ -2.03
UPK1AO00322 SEPT14P24-201ENST00000447236 180 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 AL590664.1-201ENST00000448065 339 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.38□□□□□ -2.03
UPK1AO00322 AL109741.2-201ENST00000455561 343 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
UPK1AO00322 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.38□□□□□ -2.03
UPK1AO00322 SEM1P1-201ENST00000506694 209 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.38□□□□□ -2.03
UPK1AO00322 RNA5SP356-201ENST00000515972 94 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 RNU6-334P-201ENST00000517072 102 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.38□□□□□ -2.03
UPK1AO00322 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.38□□□□□ -2.03
UPK1AO00322 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.38□□□□□ -2.03
UPK1AO00322 AC128657.1-201ENST00000549459 145 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.38□□□□□ -2.03
UPK1AO00322 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.38□□□□□ -2.03
UPK1AO00322 AADACP1-206ENST00000561502 1193 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 MIR4319-201ENST00000577285 85 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 RPAP2P1-201ENST00000603626 1168 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 AL035413.2-201ENST00000604801 525 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 OR2AS2P-201ENST00000606902 342 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.38□□□□□ -2.03
UPK1AO00322 AC091046.2-201ENST00000620775 665 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.38□□□□□ -2.03
UPK1AO00322 AC026634.1-201ENST00000634369 198 ntBASIC2.38□□□□□ -2.03
UPK1AO00322 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.38□□□□□ -2.03
UPK1AO00322 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
UPK1AO00322 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
UPK1AO00322 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
UPK1AO00322 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
UPK1AO00322 AC062016.1-201ENST00000355719 319 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 SNORA14A-201ENST00000364773 135 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.37□□□□□ -2.03
UPK1AO00322 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.37□□□□□ -2.03
UPK1AO00322 CD24P4-201ENST00000382840 243 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 SNORD51-201ENST00000384320 80 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 SNORA1.3-201ENST00000384676 136 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 MIR493-201ENST00000385254 89 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
UPK1AO00322 AL139039.1-201ENST00000401900 692 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 RNU2-28P-201ENST00000410457 189 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 RNU6-575P-201ENST00000411326 105 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 RPS15AP38-201ENST00000413110 372 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AC080125.1-201ENST00000414888 684 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AL096701.2-201ENST00000416920 238 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 BOLA3P4-201ENST00000418151 400 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
UPK1AO00322 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.37□□□□□ -2.03
UPK1AO00322 MTCYBP15-201ENST00000433123 1127 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AC004866.2-201ENST00000438285 481 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AC092393.1-201ENST00000439625 742 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AL831737.1-201ENST00000441288 271 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AC009961.3-201ENST00000449832 765 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AC108938.1-201ENST00000451204 136 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.37□□□□□ -2.03
UPK1AO00322 AC013828.1-201ENST00000481845 158 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 BOLA3P3-201ENST00000505182 232 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.37□□□□□ -2.03
UPK1AO00322 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.37□□□□□ -2.03
UPK1AO00322 AC125611.2-201ENST00000551907 647 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.37□□□□□ -2.03
UPK1AO00322 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.37□□□□□ -2.03
UPK1AO00322 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.37□□□□□ -2.03
UPK1AO00322 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.37□□□□□ -2.03
UPK1AO00322 AP000238.1-201ENST00000608759 426 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AC078880.5-201ENST00000617845 421 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 VN1R7P-201ENST00000619242 903 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AP003122.6-201ENST00000623831 495 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 AC092608.2-201ENST00000624427 218 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.37□□□□□ -2.03
UPK1AO00322 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.37□□□□□ -2.03
UPK1AO00322 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.37□□□□□ -2.03
UPK1AO00322 MFSD8-245ENST00000641743 948 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 MTCO1P23-201ENST00000415223 1526 ntBASIC2.37□□□□□ -2.03
UPK1AO00322 HMGB1P5-201ENST00000255320 642 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 RNU6-1066P-201ENST00000363573 105 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 FO393413.1-201ENST00000402892 195 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.36□□□□□ -2.03
UPK1AO00322 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.36□□□□□ -2.03
UPK1AO00322 AL137014.1-201ENST00000420490 1226 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 UBE2D3P3-201ENST00000426992 425 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.36□□□□□ -2.03
UPK1AO00322 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
UPK1AO00322 OR6K5P-201ENST00000447050 945 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
UPK1AO00322 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.36□□□□□ -2.03
UPK1AO00322 RFC5P1-201ENST00000454419 874 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AL031183.1-201ENST00000457667 207 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.36□□□□□ -2.03
UPK1AO00322 AC087272.1-201ENST00000523624 533 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.36□□□□□ -2.03
UPK1AO00322 AC090502.2-201ENST00000549267 280 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 HMGB1P6-201ENST00000569046 646 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.36□□□□□ -2.03
UPK1AO00322 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.36□□□□□ -2.03
UPK1AO00322 AL645944.1-201ENST00000603857 493 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms