Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 BNIP3P26-201ENST00000600827 554 ntBASIC3.38□□□□□ -1.87
DDX39AO00148 AL590099.1-201ENST00000615276 138 ntBASIC3.38□□□□□ -1.87
DDX39AO00148 AC090772.4-201ENST00000623599 362 ntBASIC3.38□□□□□ -1.87
DDX39AO00148 AC231657.1-201ENST00000624313 397 ntBASIC3.38□□□□□ -1.87
DDX39AO00148 MTCO1P9-201ENST00000505577 1534 ntBASIC3.38□□□□□ -1.87
DDX39AO00148 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX39AO00148 SRP72P2-201ENST00000344851 1979 ntBASIC3.38□□□□□ -1.87
DDX39AO00148 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX39AO00148 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX39AO00148 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX39AO00148 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
DDX39AO00148 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX39AO00148 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX39AO00148 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX39AO00148 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DDX39AO00148 RNU6-560P-201ENST00000364007 108 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 CD24P4-201ENST00000382840 243 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 RNA5SP252-201ENST00000391131 119 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 EEF1A1P41-201ENST00000414667 207 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX39AO00148 COTL1P1-201ENST00000422309 375 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX39AO00148 RPL26P6-201ENST00000440913 438 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 TXNP1-201ENST00000441872 371 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AL031183.1-201ENST00000457667 207 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AC097493.1-201ENST00000463958 372 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AL049873.1-201ENST00000480540 376 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 FAM172BP-201ENST00000487497 1089 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX39AO00148 PRELID3BP6-201ENST00000503839 571 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX39AO00148 AC026801.2-201ENST00000515352 425 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 RNU6-1231P-201ENST00000517185 103 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.37□□□□□ -1.87
DDX39AO00148 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX39AO00148 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX39AO00148 AC011451.2-201ENST00000604303 598 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 HSPE1P7-201ENST00000604681 321 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AL158050.2-201ENST00000605336 568 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AL357080.1-201ENST00000617394 239 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AC027309.3-201ENST00000623419 351 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX39AO00148 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX39AO00148 AC233263.6-201ENST00000631132 1963 ntBASIC3.37□□□□□ -1.87
DDX39AO00148 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX39AO00148 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX39AO00148 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
DDX39AO00148 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
DDX39AO00148 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX39AO00148 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX39AO00148 AL390862.1-201ENST00000635467 1469 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 RNU5A-1-201ENST00000362698 116 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX39AO00148 USP9YP11-201ENST00000427537 717 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 DPPA2P1-201ENST00000428060 556 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
DDX39AO00148 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX39AO00148 RPS3AP14-201ENST00000483907 780 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX39AO00148 SCGB1D5P-201ENST00000515134 247 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 RNU6-528P-201ENST00000516926 100 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.36□□□□□ -1.87
DDX39AO00148 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX39AO00148 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX39AO00148 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX39AO00148 AL512347.1-201ENST00000566420 503 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.36□□□□□ -1.87
DDX39AO00148 LARP7P3-201ENST00000579888 337 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX39AO00148 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX39AO00148 BBIP1P1-201ENST00000602999 279 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 AL450472.3-201ENST00000615578 367 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 MIR6130-201ENST00000619419 109 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.36□□□□□ -1.87
DDX39AO00148 AC012321.1-201ENST00000561622 1588 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX39AO00148 MTND4P9-201ENST00000507819 1346 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX39AO00148 AL022578.1-201ENST00000439330 1433 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 AC005832.2-201ENST00000538921 1430 ntBASIC3.36□□□□□ -1.87
DDX39AO00148 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
DDX39AO00148 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX39AO00148 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX39AO00148 Y_RNA.234-201ENST00000364409 97 ntBASIC3.35□□□□□ -1.87
DDX39AO00148 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
DDX39AO00148 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX39AO00148 VN1R51P-201ENST00000411675 945 ntBASIC3.35□□□□□ -1.87
DDX39AO00148 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.35□□□□□ -1.87
DDX39AO00148 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX39AO00148 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX39AO00148 AC092573.2-201ENST00000434546 243 ntBASIC3.35□□□□□ -1.87
DDX39AO00148 NANOGP2-201ENST00000435391 727 ntBASIC3.35□□□□□ -1.87
DDX39AO00148 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX39AO00148 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
DDX39AO00148 AC093392.2-201ENST00000450682 337 ntBASIC3.35□□□□□ -1.87
DDX39AO00148 BX322784.1-201ENST00000455793 1077 ntBASIC3.35□□□□□ -1.87
DDX39AO00148 AC096576.1-201ENST00000489014 359 ntBASIC3.35□□□□□ -1.87
DDX39AO00148 AP000867.2-201ENST00000532468 320 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms