Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CCDC188H7C350 U3.20-201ENST00000390909 217 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 SNORD17-201ENST00000390930 237 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC188H7C350 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC188H7C350 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC188H7C350 AL451062.2-201ENST00000427515 271 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AC006946.1-201ENST00000429106 328 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC188H7C350 SNRPEP4-201ENST00000435815 279 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 YWHAZP7-201ENST00000436906 631 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 AL008629.1-201ENST00000438615 184 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 MTCO1P27-201ENST00000448269 226 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 UQCRHP3-201ENST00000451503 251 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 RBMY2UP-201ENST00000453474 324 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AC104308.1-201ENST00000454621 333 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 AC072039.1-201ENST00000477611 581 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC188H7C350 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC188H7C350 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC188H7C350 NPM1P41-201ENST00000512920 831 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 RNU1-45P-201ENST00000517191 141 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 MRPS36P3-201ENST00000519284 130 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC188H7C350 HIGD1AP10-201ENST00000527837 282 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC188H7C350 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC188H7C350 AC090888.2-201ENST00000559765 1144 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC188H7C350 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC188H7C350 AL845331.3-202ENST00000562856 261 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC188H7C350 MTATP6P24-201ENST00000576835 677 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 MIR4429-201ENST00000580105 73 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 MIR4444-1-201ENST00000581696 74 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 MIR4444-2-201ENST00000584390 74 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC188H7C350 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 AL109653.1-201ENST00000603091 248 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 AP000770.2-201ENST00000623694 100 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 PCMTD1P7-201ENST00000634506 357 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AC093831.2-201ENST00000624393 3427 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.87
CCDC188H7C350 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC188H7C350 AC138915.3-201ENST00000562908 1389 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AP000526.1-201ENST00000603308 1388 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC188H7C350 RNU6-637P-201ENST00000384050 107 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCDC188H7C350 AL590084.2-201ENST00000401481 382 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 MTND4P13-201ENST00000402078 1023 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 MIR1290-201ENST00000408735 78 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 RNU6-516P-201ENST00000411381 104 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AC098592.1-201ENST00000419352 333 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC188H7C350 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC188H7C350 MTATP6P4-201ENST00000427725 675 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC188H7C350 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC188H7C350 UBE2FP3-201ENST00000436366 524 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC188H7C350 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC188H7C350 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC188H7C350 AP000542.1-201ENST00000448473 371 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC188H7C350 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC188H7C350 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC188H7C350 SNORD121B-201ENST00000458838 81 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 snoU13.22-201ENST00000459428 104 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 RN7SL75P-201ENST00000461926 281 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AC092754.2-201ENST00000463506 460 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC188H7C350 LINC00888-204ENST00000487386 421 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 RN7SL283P-201ENST00000489055 303 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AL049874.1-201ENST00000489560 388 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 POU5F1P7-201ENST00000508759 541 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AC112673.1-201ENST00000513168 575 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 GMPSP1-201ENST00000514075 579 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 IGKV2-26-201ENST00000518305 343 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AC068587.4-201ENST00000533893 186 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC188H7C350 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC188H7C350 VN1R92P-201ENST00000598511 928 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 MIR6130-201ENST00000619419 109 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AC009268.2-201ENST00000621925 457 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
CCDC188H7C350 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC188H7C350 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms