Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC099063.3-201ENST00000642066 185 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 AC092326.2-201ENST00000624772 1561 ntBASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA3F8WFD2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC009812.4-201ENST00000569134 1805 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 RNA5SP267-201ENST00000364893 126 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 SNORA9-201ENST00000384215 133 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AL391417.1-201ENST00000404100 426 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AP000567.1-201ENST00000406413 156 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 MIR1305-201ENST00000408300 86 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AL158156.1-201ENST00000422509 473 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 ATP5JP1-201ENST00000431631 322 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 FAM103A2P-201ENST00000444122 354 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 ART2BP-201ENST00000453501 499 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 RPL23AP14-201ENST00000468281 468 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC108860.1-201ENST00000484521 383 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC026784.1-201ENST00000507986 352 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 MTATP6P15-201ENST00000527233 835 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC068587.4-201ENST00000533893 186 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC037471.2-201ENST00000564941 598 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 MIR5195-201ENST00000583555 115 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AP001029.3-201ENST00000588063 596 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AL031985.2-201ENST00000600955 480 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 PLCE1P1-201ENST00000622094 305 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 PCMTD1P7-201ENST00000634506 357 ntBASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA3F8WFD2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AF228730.1-201ENST00000397972 663 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 MTND4P20-201ENST00000424125 869 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 SETP5-201ENST00000437270 562 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC108734.1-201ENST00000439549 399 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 BX510359.1-201ENST00000456973 237 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 RPS23P3-201ENST00000470993 430 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC022483.1-201ENST00000514020 567 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC026801.2-201ENST00000515352 425 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 RNU1-61P-201ENST00000516107 151 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC007954.1-201ENST00000554198 494 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 MIR3186-201ENST00000577404 85 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 MIR3200-201ENST00000580767 85 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC060771.1-201ENST00000582031 164 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC090616.2-202ENST00000584248 222 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AL360219.1-201ENST00000610230 366 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 VIS1.1-201ENST00000610517 203 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AL442067.2-201ENST00000614033 363 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC008147.4-201ENST00000617570 1204 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC092628.2-201ENST00000622492 339 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AP003485.2-201ENST00000623636 610 ntBASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPA3F8WFD2 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
NPIPA3F8WFD2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA3F8WFD2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPIPA3F8WFD2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA3F8WFD2 AF117829.1-206ENST00000621883 3802 ntBASIC3.17□□□□□ -1.9
NPIPA3F8WFD2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.17□□□□□ -1.9
NPIPA3F8WFD2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA3F8WFD2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NPIPA3F8WFD2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms