Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 Y_RNA.38-201ENST00000362617 102 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 RNU6-996P-201ENST00000365438 107 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 SMIM11P1-201ENST00000369586 178 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 SNORA36C-201ENST00000384289 132 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 MIR134-201ENST00000385258 73 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 GTF2IP20-201ENST00000431663 360 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AL132765.1-201ENST00000434165 553 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 HMGB1P31-201ENST00000437242 427 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 RPS26P2-201ENST00000440331 348 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC092451.1-201ENST00000480211 153 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 RN7SL817P-201ENST00000480777 288 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC105137.1-201ENST00000484355 562 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC069439.1-201ENST00000494739 167 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 RPS27AP13-201ENST00000498403 237 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 PARP4P3-201ENST00000510265 317 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 RNA5SP503-201ENST00000517047 117 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 OR5BN1P-201ENST00000532955 829 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AP004242.1-201ENST00000533701 349 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 CYCSP29-201ENST00000533731 318 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 TRAV8-5-201ENST00000537369 341 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 CKAP2P1-201ENST00000555477 2049 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AP001029.3-201ENST00000588063 596 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 DPPA3P3-201ENST00000603842 430 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AL355810.1-201ENST00000614629 552 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 MIR3662-201ENST00000637030 95 ntBASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MBD3L4A6NDZ8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 MAPK10-320ENST00000641462 6696 ntBASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 AL592182.3-201ENST00000642132 3304 ntBASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.9□□□□□ -1.78
MBD3L4A6NDZ8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 DEFB108F-201ENST00000344638 222 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RN7SKP44-201ENST00000363602 316 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RNU1-132P-201ENST00000364300 164 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RNU6-946P-201ENST00000383878 107 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RNU1-63P-201ENST00000383902 164 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RPS26P8-201ENST00000393490 348 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 USP9YP6-201ENST00000413550 854 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC114491.1-201ENST00000416095 246 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 ZNF90P2-204ENST00000419323 1075 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC018630.2-202ENST00000422992 927 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RPL23AP25-201ENST00000430973 463 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 ATP5JP1-201ENST00000431631 322 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RPL36AP6-201ENST00000435770 321 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 MTATP6P23-201ENST00000440153 476 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RPL31P13-201ENST00000484151 370 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC041039.1-201ENST00000485656 536 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RPL21P129-201ENST00000491732 478 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC103843.2-201ENST00000530523 682 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 RPL23AP84-201ENST00000571193 464 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 MIR4472-2-201ENST00000582069 67 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC093227.2-201ENST00000589357 285 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 BNIP3P22-201ENST00000593399 556 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 NRBF2P5-201ENST00000603087 788 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 LINC00901.1-201ENST00000617252 152 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC091905.2-201ENST00000623143 306 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC025034.2-201ENST00000623264 286 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 MTND5P17-201ENST00000418405 1603 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms