Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 AL138713.1-201ENST00000624026 2130 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 RNU5E-8P-201ENST00000363502 116 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 DEFB109C-201ENST00000382575 264 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 DEFB109B-201ENST00000382656 264 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 RNU6-76P-201ENST00000384060 104 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 MIR19A-201ENST00000384878 82 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 RN7SKP53-201ENST00000411337 315 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 PPP1R11P2-201ENST00000423543 382 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 MTCO2P16-201ENST00000436962 677 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC092641.1-201ENST00000440229 772 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL049734.2-201ENST00000441066 616 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 RNU7-59P-201ENST00000459101 61 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 RPL7P15-201ENST00000461190 712 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 RN7SL442P-201ENST00000473804 320 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 RPS4XP22-201ENST00000480755 780 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 RANP9-201ENST00000519957 271 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 TOMM20P2-201ENST00000540082 421 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC121334.2-201ENST00000605387 271 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC090425.2-201ENST00000608818 501 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC138749.5-201ENST00000611461 208 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC090970.3-201ENST00000612566 866 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC093838.1-201ENST00000613014 469 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC116165.2-201ENST00000616705 206 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AP003355.3-201ENST00000623465 114 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC021755.1-201ENST00000559747 1447 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 AP004289.2-201ENST00000444413 1457 ntBASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.08□□□□□ -1.92
TRBV5-5A0A0J9YX44 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 MIR372-201ENST00000362225 67 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 RNU1-13P-201ENST00000384499 162 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 MIR30B-201ENST00000384850 88 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 RNU6-278P-201ENST00000390945 109 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 FCF1P10-201ENST00000407590 479 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC009237.5-201ENST00000414271 501 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC093578.1-201ENST00000415219 368 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 USP9YP13-201ENST00000417797 480 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL117339.2-201ENST00000430475 180 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 MTND1P28-201ENST00000435623 950 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 RPL21P89-201ENST00000444021 467 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 TAF9P1-201ENST00000445421 515 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AP000936.2-201ENST00000447151 681 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL592447.1-201ENST00000447592 540 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 ST13P20-201ENST00000447996 1065 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 PDSS1P2-201ENST00000449397 678 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 HMGB3P8-201ENST00000449709 577 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 TAF9P2-201ENST00000454958 515 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC105914.1-201ENST00000511798 226 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC022616.6-201ENST00000520479 119 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AP000857.1-201ENST00000532151 543 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 RFPL1S-203ENST00000539579 330 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC123904.2-201ENST00000548059 300 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC004024.1-201ENST00000549244 247 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL133153.1-201ENST00000557756 303 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 BNIP3P8-201ENST00000597863 560 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 BDH2P1-201ENST00000602288 736 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AL358072.1-201ENST00000604156 575 ntBASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.07□□□□□ -1.92
TRBV5-5A0A0J9YX44 AC108479.2-201ENST00000617314 601 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms