Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC244517.1-201ENST00000606030 2086 ntBASIC1.75□□□□□ -2.13
HLA-DRB4X5D2U9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 MIR21-201ENST00000362134 72 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 RNA5SP354-201ENST00000391247 136 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 RN7SKP140-201ENST00000411196 284 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 RPS15AP38-201ENST00000413110 372 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AL512504.1-201ENST00000415494 778 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC009414.1-201ENST00000427200 443 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 MTATP6P11-201ENST00000428071 670 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC092798.1-201ENST00000458542 409 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 OR5H5P-201ENST00000503164 928 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC103783.1-201ENST00000520506 373 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC025755.1-201ENST00000521306 278 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 NDUFS5P6-201ENST00000529136 295 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC018630.1-201ENST00000541376 925 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC126177.3-201ENST00000551839 688 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC009097.3-201ENST00000563557 1018 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 EIF5A2P1-201ENST00000564027 460 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC079089.3-201ENST00000603094 673 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AL355812.1-201ENST00000603215 216 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 MTCO3P22-201ENST00000603219 784 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AL356280.1-201ENST00000603614 379 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC009159.1-201ENST00000618386 642 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 UCA1.1-201ENST00000620952 75 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC025034.2-201ENST00000623264 286 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC009812.4-201ENST00000569134 1805 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 AC010680.1-201ENST00000590024 3590 ntBASIC1.74□□□□□ -2.13
HLA-DRB4X5D2U9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 OR56A5-201ENST00000340110 738 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 U3.29-201ENST00000391296 212 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 ATP5F1P1-201ENST00000433775 569 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 IPO7P1-201ENST00000442031 636 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC097499.1-201ENST00000444277 208 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 OR6K5P-201ENST00000447050 945 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC104435.1-201ENST00000483483 166 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 RN7SL636P-201ENST00000497504 294 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 EIF4EP3-201ENST00000498782 656 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 GTF2IP9-201ENST00000502460 301 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC025459.1-201ENST00000504072 156 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC069306.1-201ENST00000507006 843 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC109329.2-201ENST00000519658 482 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC087276.1-201ENST00000529659 480 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC068339.2-201ENST00000534395 618 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC027176.1-201ENST00000560204 514 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 FAM60BP-201ENST00000578364 658 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 MIR5007-201ENST00000583098 95 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 AC025588.4-201ENST00000615802 908 ntBASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DRB4X5D2U9 MTCO1P6-201ENST00000481192 1384 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 AL513185.3-201ENST00000433335 1300 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 SNORA6-201ENST00000384033 151 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 RNU4-52P-201ENST00000384209 138 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 RNU6-198P-201ENST00000384258 104 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 SNORA36C-201ENST00000384289 132 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 RNU6-1226P-201ENST00000384317 107 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 RNU6-712P-201ENST00000410558 100 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 AC010385.1-201ENST00000412374 256 ntBASIC1.72□□□□□ -2.13
HLA-DRB4X5D2U9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms